ETHZ-INS/scanMiR

Issues

• Error when using viewTargetAlignment

  #19 opened 4 months ago by Zehuan-D
  2

• Call pwalign::nucleotideSubstitutionMatrix() in findSeedMatches to avoid warning

  #20 opened 4 months ago by michasou
  1

• scanMiR Data using isomiRs

  #16 opened 9 months ago by JFsanchezherrero
  0

• Misc code

  #14 opened a year ago by michasou
  0

• web interface down?

  #15 opened a year ago by justinjisu
  1

• Scanning Code

  #13 opened 3 years ago by michasou
  0

• Gene / Transcript Choice

  #4 opened 4 years ago by michasou
  2

• General functionality

  #5 opened 4 years ago by michasou
  0

• New Scan (human only): full only canonical; log_kd cutoff (try 0, -1, -2)

  #7 opened 4 years ago by michasou
  0

• Show aggregated repression per transcript in the "Scan"-Hits Table

  #12 opened 4 years ago by michasou
  0

• Family column in "hits-table"

  #1 opened 4 years ago by michasou
  0

• Manhattan Plot

  #2 opened 4 years ago by michasou
  0

• miRNA target lists

  #3 opened 4 years ago by michasou
  0

• Repression correlation based on Targetscan Score

  #6 opened 4 years ago by michasou
  0

• Give Michael a xgb CV snippet

  #10 opened 4 years ago by michasou
  1

• Run Bartel's biochemical model

  #8 opened 4 years ago by michasou
  0

• Scan based on Bartel's assembled transcriptome

  #9 opened 4 years ago by michasou
  0

• Run correlation on extra mouse dataset from Bartel

  #11 opened 4 years ago by michasou
  0