Ecogenomics/BamM

Issues

• Problems installing BamM

  #56 opened 4 years ago by lucaspompeun
  4

• libcfu :: compilation error

  #58 opened 5 years ago by EricDeveaud
  2

• bamm filter

  #57 opened 5 years ago by liaohu1231
  1

• 'bamm filter' command with tpmean mode can't produce index file (bai file).

  #55 opened 6 years ago by heavennew
  2

• bamm extract: bamm-specific header prefixes are not compatible with downstream analyses tools

  #49 opened 8 years ago by jvollme
  0

• mysterious error when building with python3 version of Anaconda 5.1.0

  #52 opened 7 years ago by skaffen-amtiskaw
  1

• Links summary

  #51 opened 7 years ago by caonetto
  1

• Testing BamM using nosetests

  #16 opened 10 years ago by rdl88
  28

• Bamm available as conda package

  #50 opened 7 years ago by mdehollander
  2

• libcfu/lib not included in code

  #39 opened 9 years ago by osvatic
  8

• v1.7.3 build specifications

  #48 opened 8 years ago by manifestoso
  0

• nosetests failed

  #34 opened 9 years ago by blancaverag
  10

• More information about your docker file

  #47 opened 8 years ago by lfaller
  4

• "bamm parse" exits with Error message, even though "bamm make" works fine

  #46 opened 8 years ago by jvollme
  3

• An error when installing BamM

  #44 opened 8 years ago by minsookim1983
  8

• tpmean gives somewhat unintuitive results when coverage is low

  #45 opened 8 years ago by wwood
  0

• groopm parse fails with "Distance matrix 'X' must be symmetric"

  #37 opened 9 years ago by fungs
  0

• Only mapped reads stored in bam file

  #32 opened 9 years ago by mdehollander
  3

• Installing on CentOS6.6

  #21 opened 10 years ago by linsalrob
  7

• libtool required for install

  #29 opened 9 years ago by chuckpr
  4

• BamM v1.5.0 - failed nosetests - missing filtered bam files - Also python library bug from 1.5.0 and 1.4.1

  #27 opened 10 years ago by AlexRBaker
  7

• Installing on Ubuntu 14.04

  #20 opened 10 years ago by linsalrob
  5

• No file written when extracting reads from bin

  #23 opened 10 years ago by mdehollander
  3

• BamM make keeps printing the help message

  #24 opened 10 years ago by mdehollander
  3

• nosetests fails

  #18 opened 10 years ago by nr0cinu
  11

• BamM installation

  #17 opened 10 years ago by tvishniv
  26

• feature/bug request/report: restrict parse output based on ref length

  #1 opened 10 years ago by wwood
  1

• Possible string concatenation rather than int additon in bamm make version 1.1.1

  #15 opened 10 years ago by Askars
  1

• bamm make -m flag no workee

  #11 opened 10 years ago by wwood
  1

• bamm trimmed mean cannot be specified asymmetrically

  #9 opened 10 years ago by wwood
  1

• bamm make crashes if bwa is not on the system path

  #8 opened 10 years ago by donovan-h-parks
  2

• BM_median incorrectly calculates the median value for even sized arrays

  #7 opened 10 years ago by donovan-h-parks
  1

• BM_median causes segfault for empty array

  #6 opened 10 years ago by donovan-h-parks
  1