EthoML/VAME

Issues

• option to load videos for project initialization

  #129 opened a day ago
  0

• Save pose segmentation data after each session instead of segmentation algorithm method

  #128 opened a day ago
  0

• Separate module for visualization of results

  #127 opened 8 days ago
  0

• fixed seed throughout the code

  #123 opened 18 days ago
  0

• `num_features` is ambiguous

  #122 opened 18 days ago
  0

• Remove defined seed value in model creation in deployment

  #121 opened a month ago
  0

• vame.train_model error

  #120 opened 8 days ago
  2

• Preprocessing refactoring

  #119 opened 8 days ago
  3

• "vame.egocentric_alignment" reports FileNotFoundError : my_video-5-PE-seq.npy'

  #118 opened 2 months ago
  0

• Preprocessing module

  #117 opened a month ago
  0

• Build compatibility with LightningPose

  #115 opened 14 days ago
  0

• Do not presume same file names for videos and pose_estimation files

  #114 opened 2 months ago
  0

• Slow align_egocentrical

  #113 opened 8 days ago
  0

• Adopt `movement` Xarray data format

  #111 opened 8 days ago
  0

• Documentation

  #109 opened 8 days ago
  0

• Remove old doctrings at top of files

  #108 opened 14 days ago
  0

• rename `file` to `session`

  #107 opened 14 days ago
  0

• rename `parametrization` to `segmentation_algorithm`

  #106 opened 14 days ago
  0

• project names: remove auto adding date

  #105 opened 14 days ago
  0

• num_features should be extracted from DLC data

  #100 opened 14 days ago
  1

• Move find_zero_labels() from community to pose segmentation step

  #97 opened 2 months ago
  0

• Egocentric alignment outputs with incorrect column order

  #96 opened 8 days ago
  1

• Train Issue with aligned data

  #94 opened 3 months ago
  5

• import error

  #93 opened 3 months ago
  2

• User friendly way to select reference points for alignment

  #89 opened 8 days ago
  0

• Community function not outputing 'Cohort Community Bag' and 'Hierarchy' list

  #88 opened 2 months ago
  1

• Motif not being assigned to a community

  #87 opened 2 months ago
  5

• UMAP figures created without legends

  #86 opened 4 months ago
  1

• Iterating over wrong number of clusters

  #85 opened 2 months ago
  0

• Cannot generate community videos for cohort == True

  #84 opened 2 months ago
  1

• Belly index hardcoded

  #83 opened 2 months ago
  1

• videos get unnecessarily copied

  #82 opened 2 months ago
  2

• Egocentric Data Parameter Default Set to False

  #80 opened 2 months ago
  1

• Add README to pypi release page

  #78 opened a month ago
  0

• Rename functions for clarity

  #77 opened 2 months ago
  1

• pose_segmentation() stopped processing after embeddings

  #76 opened 5 months ago
  1

• float division by zero for small datasets

  #75 opened 5 months ago
  0

• Remove extra 'VAME' folder in results folder

  #74 opened 2 months ago
  1

• Session parameterization_labels.npy is incorrectly outputing numbers greater than n_cluster

  #71 opened 5 months ago
  1

• Include versioning tags and publish releases

  #70 opened a month ago
  0

• Update parametrization dependent functions to accept parametrization as argument

  #65 opened 6 months ago
  0

• Change community analysis cohort level saved files path

  #64 opened 6 months ago
  0

• Include search functionality in the documentation page

  #63 opened 6 months ago
  0

• Move utils functions to utils model

  #60 opened 6 months ago
  0

• Remove unused functions

  #59 opened 6 months ago
  0

• Build DANDI Compatibility

  #55 opened 6 months ago
  0

• Build NWB compatibility

  #54 opened 6 months ago
  0

• Automatically run both clustering algorithms (HMM and kmeans) instead of using parameterization variable in the config

  #53 opened 6 months ago
  0

• Map and refactor functions to avoid code repetition

  #50 opened 6 months ago
  0

• Community analysis and umap should be separated

  #49 opened 6 months ago
  0