Pinned Repositories
BatchViewer
A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.
FeatureSelection
feature selection: nice, easy and with multiprocessing support
hiddenlayer
Neural network graphs and training metrics for PyTorch, Tensorflow, and Keras.
kits21
The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge
machine_learning_1
ACDC2017
batchgenerators
A framework for data augmentation for 2D and 3D image classification and segmentation
BraTS2017
HD-BET
MRI brain extraction tool
nnUNet
FabianIsensee's Repositories
FabianIsensee/BatchViewer
A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.
FabianIsensee/hiddenlayer
Neural network graphs and training metrics for PyTorch, Tensorflow, and Keras.
FabianIsensee/FeatureSelection
feature selection: nice, easy and with multiprocessing support
FabianIsensee/kits21
The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge
FabianIsensee/machine_learning_1
FabianIsensee/cremi_python
Python scripts to read and write the CREMI hdf5 file format.
FabianIsensee/ilastik
ilastik-shell, applets, and workflows to string them together.
FabianIsensee/Lasagne
Lightweight library to build and train neural networks in Theano
FabianIsensee/medpy-1
Medical image processing in Python
FabianIsensee/MONAI
AI Toolkit for Healthcare Imaging
FabianIsensee/Recipes
Lasagne recipes: examples, IPython notebooks, ...
FabianIsensee/ilastik-feature-selection
Select filter features with mutual-information-based methods