MIC-DKFZ/HD-BET

Issues

• Where (if at all) does intensity non-uniformity (INU) correction occur?

  #44 opened 2 years ago by TPDeramus
  1

• problem when processing monkey brains

  #52 opened 9 months ago by mingli842
  1

• ModuleNotFoundError: No module named 'imp' with Python v3.12

  #58 opened 6 months ago by appukuttan-shailesh
  3

• Deprecation warning

  #60 opened 6 months ago by roohy466
  2

• Add support for 'mps' device for Apple Silicon

  #54 opened 8 months ago by mrunibe
  0

• problem with hd-bet_params

  #31 opened 3 years ago by sahar90o
  2

• ConnectionRefusedError: [Errno 111] Connection refused

  #38 opened 2 years ago by Curryifgou
  1

• 'HD-bet' is not an internal or external command, nor a runnable program or batch file.

  #24 opened 2 years ago by ljljlj02
  10

• calling hd-bet from r-studio

  #43 opened 2 years ago by ArzuHas
  1

• Can't run hd-bet on apple silicon

  #51 opened a year ago by LennartPhil
  1

• hd-bet not recognized

  #50 opened a year ago by Artemislab1
  0

• incompatible with numpy>=1.25

  #45 opened a year ago by sh-shahrokhi
  4

• more graceful installation without development mode and separate download of model weights?

  #42 opened 2 years ago by neuronflow
  2

• Cannot run postprocessing because the postprocessing file is missing

  #41 opened 2 years ago by ZubicarayG
  1

• SimpleITK==2.0.2

  #25 opened 3 years ago by patricio-astudillo
  6

• Order of pre-processing: HD-BET --> B1-field / inhomogeneity correction?

  #40 opened 2 years ago by ArmanAvesta
  0

• Difference between -o and -s ?

  #37 opened 2 years ago by tashrifbillah
  5

• What packages do I need for CPU-based HD-BET?

  #36 opened 2 years ago by tashrifbillah
  1

• SimpleITK>=2.0.2 fails to open nii files

  #35 opened 2 years ago by patricio-astudillo
  0

• AI behind HD-BET?

  #34 opened 2 years ago by rbumm
  0

• Trouble installing on Mac OS X 10.13.6

  #7 opened 3 years ago by Rad-dude
  4

• Running HD-BET from a python script in a Jupyter Notebook

  #32 opened 3 years ago by Jakeyboy22
  0

• Set number of cores

  #30 opened 3 years ago by jrdalenberg
  0

• unable to download 2.model.

  #29 opened 3 years ago by xNeorem
  4

• HD-BET with a convenient GUI - in 3D Slicer

  #28 opened 3 years ago by lassoan
  1

• Contribute HD-BET to OpenSource Framework Nobrainer-ZOO

  #26 opened 3 years ago by Aakanksha-Rana
  0

• Security policy error

  #14 opened 3 years ago by andersenthomas
  3

• pip3 NOT pip!

  #8 opened 5 years ago by drswgw
  12

• Can I get a pretrained weight?

  #19 opened 3 years ago by han-yeol
  2

• Use for MRA data

  #20 opened 3 years ago by saro92
  3

• Error on Model download

  #21 opened 3 years ago by JonDohn
  1

• Almost no brain detected

  #5 opened 5 years ago by Qdelannoy
  3

• Better if you have TensorFlow version

  #17 opened 3 years ago by ljljlj02
  1

• GPU not recognized?

  #16 opened 4 years ago by keithcdodd
  3

• default parameter download folder inconsistent

  #15 opened 4 years ago by function2-llx
  1

• Multi-GPU

  #12 opened 4 years ago by vkyprmr
  2

• hd-bet not working on HPC cluster

  #13 opened 4 years ago by tommydino93
  2

• 'sform' info stripped from output skull-stripped images

  #10 opened 4 years ago by beaudsy
  2

• Issue with mkl-service

  #9 opened 5 years ago by akezhanmussa
  3

• MacOS error

  #6 opened 5 years ago by neurolabusc
  6

• Can i use bet offline

  #4 opened 5 years ago by u101022205
  2

• How to train HD-bet on new data?

  #2 opened 6 years ago by zeydabadi
  4

• Regarding application of InstanceNorm3d and F.leaky_relu twice on the input

  #3 opened 6 years ago by Geeks-Sid
  1

• error running bet-hd on cpu

  #1 opened 6 years ago by zeydabadi
  5