Pinned Repositories
spades
SPAdes Genome Assembler
hello-world
LEFSE-anaylis-in-R-with-phylose-object
amr
AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.
fastlin
Mycobacterium tuberculosis complex lineage typing
Unicycler
hybrid assembly pipeline for bacterial genomes