GeorgWa

GeorgWa's Stars

• chenghui03/Calib_RT

  Language:Python31

• RasmussenLab/pimms

  Imputing proteomics data using deep learning models

  Language:Python132

• LBL-EESA/fastkde

  Language:Python4910

• TalusBio/ionmesh

  Language:Rust8

• Nesvilab/diaTracer

  A diaPASEF spectrum-centric analysis tool

  111

• Protea-Glycosciences/GlyCombo

  GlyCombo, a combinatorial glycan composition assignment tool

  Language:C#12

• adhutz/proteolysee

  Source code for the proteolysee shiny app

  Language:R1

• BorgwardtLab/proteinshake

  Protein structure datasets for machine learning.

  Language:Python916

• jalew188/DiaNN-speclib

  Language:Jupyter Notebook1

• DILiS-lab/pyproteonet

  Python package for imputation, peptide-to-protein aggregation as well as in silico data creation of proteomics data with a specific focus on the development and evaluation of imputation methods in proteomics. Also provides proteomics specific imputation methods based on graph neural networks.

  Language:Python1

• rust-lang/portable-simd

  The testing ground for the future of portable SIMD in Rust

  Language:Rust84773

• Nesvilab/MSFragger

  Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics

  Language:HTML997

• MannLabs/alpharaw

  An open-source Python package to unify raw MS data accession and storage.

  Language:Jupyter Notebook163

• MannLabs/timsrust

  Language:Rust209

• Nesvilab/EntrapBench

  Generate entrapment database and calculate false discovery proportion (FDP)

  Language:Java41

• thermofisherlsms/RawFileReader

  Language:C#4317

• numba/numba

  NumPy aware dynamic Python compiler using LLVM

  Language:Python9.6k1.1k

• PyO3/rust-numpy

  PyO3-based Rust bindings of the NumPy C-API

  Language:Rust1.1k100

• huggingface/candle

  Minimalist ML framework for Rust

  Language:Rust14.6k831

• rust-lang/rustlings

  :crab: Small exercises to get you used to reading and writing Rust code!

  Language:Rust51.4k9.9k

• MannLabs/SPARCSpy

  Language:Jupyter Notebook96

• rust-ndarray/ndarray

  ndarray: an N-dimensional array with array views, multidimensional slicing, and efficient operations

  Language:Rust3.4k296

• PyO3/pyo3

  Rust bindings for the Python interpreter

  Language:Rust11.5k707

• reflex-dev/reflex

  🕸️ Web apps in pure Python 🐍

  Language:Python18.1k1k

• exaloop/codon

  A high-performance, zero-overhead, extensible Python compiler using LLVM

  Language:C++14k499

• TalusBio/diadem

  Language:Python81

• yu-takagi/StableDiffusionReconstruction

  Takagi and Nishimoto, CVPR 2023

  Language:Jupyter Notebook1.1k59

• styfenschaer/rocket-fft

  Rocket-FFT makes Numba aware of numpy.fft and scipy.fft. Rocket-FFT takes its name from the PocketFFT Fast Fourier Transformation library that powers it, and Numba's goal of making your scientific Python code blazingly fast - like a rocket. 🚀

  Language:Python572

• MannLabs/directlfq

  Fast and accurate label-free quantification for small and very large numbers of proteomes

  Language:Jupyter Notebook364

• MannLabs/alphatims

  An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistry.

  Language:Python7824