Pinned Repositories
braincoder
Encoding models for fMRI implemented in tensorflow
fastdm
Python wrapper for the fast-dm drift diffusion model fitter
fmriprep
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
hbm2019_nideconv
Poster and notebooks for OHBM 2019
in_limbo
A Python module to analyze fMRI data using the 'in limbo'-approach and sandwich estimators
N-gram-melody-generation
pycortex
Pycortex is a python-based toolkit for surface visualization of fMRI data
pydbm
Python package implementing the Dynamic Belief Model by Yu and Cohen (2008)
pymp2rage
Lightweight Python package to process MP2RAGE and ME-MP2RAGE-data
summerschool2017_notebooks
IPython Notebooks for the 2017 model-based neuroscience summer school in Amsterdam
Gilles86's Repositories
Gilles86/pydbm
Python package implementing the Dynamic Belief Model by Yu and Cohen (2008)
Gilles86/summerschool2017_notebooks
IPython Notebooks for the 2017 model-based neuroscience summer school in Amsterdam
Gilles86/pycortex
Pycortex is a python-based toolkit for surface visualization of fMRI data
Gilles86/fmriprep
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
Gilles86/pybids
Python tools for querying and manipulating BIDS datasets.
Gilles86/ANTS_registration_docker
Gilles86/bias_project
Gilles86/bids-specification
Brain Imaging Data Structure (BIDS) Specification
Gilles86/bidsapp_hddm
Rapid prototype of BIDS app that can fit hierarchical HDDM
Gilles86/binocular_experiments
Psychopy code to make binocular experiments
Gilles86/binocular_rivalry_exptools
Gilles86/bistable_motion_pupil
Gilles86/br_anaglyph
Gilles86/deeplearn_ddm
Gilles86/docker_images
repo for docker scripts and images in the lab
Gilles86/ep-parameter-estimation-nn
Gilles86/FIRDeconvolution
Python class that performs finite impulse response fitting on time series data.
Gilles86/hddm
HDDM is a python module that implements Hierarchical Bayesian parameter estimation of Drift Diffusion Models (via PyMC).
Gilles86/hello-world
Just another repository
Gilles86/hires_prf
Gilles86/histochemical_mri_stn
Gilles86/moving_dots
Moving dots demo for Anne
Gilles86/nipype
Workflows and interfaces for neuroimaging packages
Gilles86/psychopy
For running psychology and neuroscience experiments
Gilles86/pymaskplot
Gilles86/pymc3
Probabilistic Programming in Python. Uses Theano as a backend, supports NUTS and ADVI.
Gilles86/pystain
Gilles86/python_workshop-Basel
The repository for the Nov 1-2 python workshop in Basel
Gilles86/rubicon
Gilles86/spynoza
python package for fMRI data processing