Gray-Tu

Gray-Tu's Stars

• xieliaing/CausalInferenceIntro

  Causal Inference for the Brave and True的中文翻译版。全部代码基于Python，适用于计量经济学、量化社会学、策略评估等领域。英文版原作者：Matheus Facure

  Language:Jupyter Notebook677128

• DataCanvasIO/YLearn

  YLearn, a pun of "learn why", is a python package for causal inference

  Language:Python40975

• godkin1211/nanopore_talk

  Deposit slides from my previous talks which are all about long-read sequencing or nanopore sequencing

  2

• schneebergerlab/plotsr

  Tool to plot synteny and structural rearrangements between genomes

  Language:Python29128

• mito-ds/mito

  The mitosheet package, trymito.io, and other public Mito code.

  Language:Jupyter Notebook2.3k163

• marbl/CHM13

  The complete sequence of a human genome

  92899

• ProductHired/open-product-management

  A curated list of product management advice for technical people.

  3.9k789

• Teichlab/celltypist

  A tool for semi-automatic cell type classification

  Language:Python31846

• phasebook/phasebook

  Haplotype aware de novo assembly of diploid genome from long reads

  Language:C++5411

• sib-swiss/training-collection

  Collection of bioinformatics training materials

  Language:Python989183

• ryanlayer/samplot

  Plot structural variant signals from many BAMs and CRAMs

  Language:Python53468

• filebrowser/filebrowser

  📂 Web File Browser

  Language:Go27.3k3.1k

• Nealelab/UK_Biobank_GWAS

  Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release

  Language:Python352107

• soumitag/multiSLIDE

  Multi-omics Systems-Level Interactive Data Exploration (multiSLIDE)

  Language:Java41

• molsysbio/speed2

  SPEED2:Inferring upstream pathway activity from differential gene expression

  Language:HTML64

• trevismd/statannotations

  add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.

  Language:Python68675

• amplab/snap

  Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data

  Language:C++28866

• shwhalen/ml-pitfalls

  Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"

  Language:Jupyter Notebook4316

• onlinemad/5000-lottery

  振興五倍券加碼券速查

  Language:HTML6018

• Illumina/REViewer

  A tool for visualizing alignments of reads in regions containing tandem repeats

  Language:C++8012

• wu-yc/scMetabolism

  Quantifying metabolism activity at the single-cell resolution

  Language:R12146

• jokergoo/circlize

  Circular visualization in R

  Language:R977147

• philipz/docker_practice

  Learn and understand Docker, with real DevOps practice!

  Language:Shell241106

• Swarbricklab-code/BrCa_cell_atlas

  Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".

  Language:R11047

• welch-lab/liger

  R package for integrating and analyzing multiple single-cell datasets

  Language:R39678

• GoekeLab/bioinformatics-workflows

  minimal example implementations for bioinformatics workflow managers

  Language:Python26446

• yeee904/RA_scRNA

  Rheumatoid Arthritis project. single cell RNA sequencing data.

  Language:R144

• jsschrepping/r_docker

  Docker container for genomics analyses in R.

  Language:R247

• sstadick/crabz

  Like pigz, but rust

  Language:Rust33513

• zhangyuqing/ComBat-seq

  Batch effect adjustment based on negative binomial regression for RNA sequencing count data

  Language:R16737