HCGB-IGTP/XICRA

XICRA join Error no samples were retrieved

Closed this issue · 2 comments

Ben7124 commented

Hello, I have a problem when I try to use the join command. I get the no samples were retrieved error, but I have the R1 and R2 fastq.gz files in the trimmed directory. Can you help me please? My command is:

XICRA join -i trimmed/ --noTrim -o joined

Files in the trimmed directory are called: sample1_R1.fastq.gz sample1_R2.fastq.gz

|==================================================|
| Join paired-end reads |
|==================================================|

--------- Starting Process ---------
10/25/2021, 19:14:08

  • Getting files from input folder...

  • Mode: fastq.

  • Extension:
    [ fastq, fq, fastq.gz, fq.gz ]

  • Input folder exists

**ERROR: No samples were retrieved. Check the input provided

Ben7124 commented

I think I got it to work now!

JFsanchezherrero commented

Hi there,
Great news! Please let me know if any other issues.
Cheers