HPABio

HPABio's Stars

• ollama/ollama

  Get up and running with Llama 3.2, Mistral, Gemma 2, and other large language models.

  Language:Go95.6k5714.7k7.6k

• open-webui/open-webui

  User-friendly AI Interface (Supports Ollama, OpenAI API, ...)

  Language:Svelte44.8k2202.5k5.5k

• terkelg/awesome-creative-coding

  Creative Coding: Generative Art, Data visualization, Interaction Design, Resources.

  Language:HTML12.9k39720874

• karpathy/minbpe

  Minimal, clean code for the Byte Pair Encoding (BPE) algorithm commonly used in LLM tokenization.

  Language:Python9.2k8436854

• deepchem/deepchem

  Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

  Language:Python5.5k1431.7k1.7k

• Doriandarko/maestro

  A framework for Claude Opus to intelligently orchestrate subagents.

  Language:Python4.2k7545645

• joeyism/linkedin_scraper

  A library that scrapes Linkedin for user data

  Language:Python2.1k45155573

• tomquirk/linkedin-api

  👨‍💼 LinkedIn API for Python

  Language:Python2k50280444

• yangkky/Machine-learning-for-proteins

  Listing of papers about machine learning for proteins.

  1.5k148182200

• Peldom/papers_for_protein_design_using_DL

  List of papers about Proteins Design using Deep Learning

  1.4k1151173

• duerrsimon/bioicons

  A library of free open source icons for science illustrations in biology and chemistry

  Language:Vue1.4k174475

• eracle/linkedin

  Linkedin Scraper using Selenium Web Driver, Chromium headless, Docker and Scrapy

  Language:Python7683822124

• allenai/papermage

  library supporting NLP and CV research on scientific papers

  Language:Python695103454

• opencobra/cobrapy

  COBRApy is a package for constraint-based modeling of metabolic networks.

  Language:Python46337668217

• Frost-group/The-Oracle-of-Zotero

  LLM Chain querying a scientific Zotero library, with citations

  Language:Python405106

• opendilab/awesome-AI-based-protein-design

  A collection of research papers for AI-based protein design

  2253014

• lynnlangit/aws-for-bioinformatics

  AWS for Bioinformatics Researchers

  Language:Jupyter Notebook1178028

• biosustain/cameo

  cameo - computer aided metabolic engineering & optimization

  Language:Python1132610244

• ProteinDesignLab/protein-design-tutorials

  Tutorials, cheat sheets, and other resources for computational methods for protein design.

  Language:Jupyter Notebook964024

• dxtbot/Arduflipper-

  Arduflipper is an Arduino based FLipper device , nothing else !

  Language:C++63775

• christophe-garon/Linkedin-Post-Scraper

  Scrapes post data from company pages

  Language:Jupyter Notebook622421

• JBEI/ART

  A machine learning tool to improve the effectiveness of strain engineering in synthetic biology

  Language:Jupyter Notebook5416220

• hiyama341/teemi

  teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, design libraries, and track samples. Open-source Python platform for workflow flexibility and automated tasks, accelerating metabolic engineering. Try teemi with our Google Colab notebooks!

  Language:Jupyter Notebook34243

• lukasbach/pensieve

  Desktop app for recording meetings from locally running apps and transcribing and summarizing them with a local LLM

  Language:TypeScript20144

• robertosolari/BioTech-Resources

  Resources for learning Biotechnology, Biology, Synthetic Biology, Genomic and Bioinformatic

  14201

• HN-lab/PyEcho

  This is a Python script developed to facilitate planning and designing of biological experiments in Multi-well Plate setup, followed by automatically generating an input file for the Beckman Coulter Labcyte Echo® 525 Liquid Handler (used for automatic multi-well acoustic liquid transfer) to execute the planned experiments.

  Language:Python72

• brsynth/straindesign

  Library to perform metabolic engineering tasks

  Language:Python5130

• DigBioLab/ExpoSeq

  ExpoSeq is a pipeline to process and analyze in various visualizations ngs data from phage display campaigns

  Language:HTML4111

• macrae/debate-checker

  Fact Checking Political Debates in Real Time

  Language:Python20

• khai-/CUO

  Codon Usage Optimizer. A Java software to optimize sequence for expression.

  Language:Java1112