HenrikBengtsson/future.batchtools

Issues

• R CMD check NOTE: Documented arguments not in \usage in documentation ...

  #91 opened 10 months ago by HenrikBengtsson
  0

• waitForWorker(): Mismatches for apparent methods not registered

  #90 opened a year ago by HenrikBengtsson
  0

• Large overhead cleaning up SGE futures

  #65 opened a year ago by wlandau
  9

• Proposed bugfix for batchtools reveals bug in future.batchtools?

  #74 opened 3 years ago by stuvet
  4

• Simple chunking with nested parallelism

  #72 opened a year ago by rrichmond
  1

• Error: Log file for job with id 1 not available

  #88 opened a year ago by gowerc
  6

• PERFORMANCE: status() to memoize "finalized" state?

  #87 opened a year ago by HenrikBengtsson
  2

• Template tools: export functions to find and render template

  #86 opened 2 years ago by HenrikBengtsson
  0

• Template tools: add option to ShellCheck rendered template

  #85 opened 2 years ago by HenrikBengtsson
  0

• Compatibility with promises package

  #80 opened 2 years ago by michaelmayer2
  2

• Slurm readLog() Error - Option to change fs.latency & scheduler.latency from batchtools_slurm or future::tweak

  #73 opened 2 years ago by stuvet
  10

• batchtools templates: `resources[["asis"]]` for as-is declarations

  #78 opened 2 years ago by HenrikBengtsson
  1

• run(), resolved()[?], and result(): the RNG state is updated - from where?

  #82 opened 2 years ago by HenrikBengtsson
  3

• Add batchtools template for SGE

  #77 opened 2 years ago by HenrikBengtsson
  0

• Add support for plan(batchtools_multicore, workers = I(1))

  #83 opened 2 years ago by HenrikBengtsson
  0

• All batchtools_nnn() functions should return the future invisibly

  #84 opened 2 years ago by HenrikBengtsson
  0

• Add nbrOfFreeWorkers()

  #67 opened 2 years ago by HenrikBengtsson
  2

• print() for BatchtoolsFuture should report on the template file used

  #79 opened 2 years ago by HenrikBengtsson
  1

• TESTS: Error: identical(Sys.getenv(), oenvs0) is not TRUE on MS Windows CRAN

  #81 opened 2 years ago by HenrikBengtsson
  1

• problem with running example parallel futures using batchtools_lsf

  #76 opened 3 years ago by haibol2016
  0

• Problem forwarding batchtools resources to individual futures

  #75 opened 3 years ago by wlandau
  4

• Getting started with plan("batchtools_lsf")

  #61 opened 3 years ago by fboehm
  2

• batchtools_slurm futures block (Was: stdout/stderr to log file only when using slurm?)

  #68 opened 3 years ago by privefl
  18

• Eqw on SGE cluster while R code finishes without error

  #71 opened 3 years ago by Luqing-Zhang
  0

• huge results file with 'conditions' - performance bottleneck

  #69 opened 3 years ago by kkmann
  4

• use batchtools directly for scheduling

  #70 opened 3 years ago by myoung3
  0

• CLEANUP: Drop S3 method await()

  #58 opened 3 years ago by HenrikBengtsson
  0

• R-devel: sprintf() coding mistakes

  #66 opened 4 years ago by HenrikBengtsson
  0

• doJobCollection error

  #59 opened 4 years ago by mkrzak
  0

• future.cache.path option broken

  #64 opened 4 years ago by rimorob
  4

• segfault

  #63 opened 4 years ago by rimorob
  3

• Collecting results without SSH key pair

  #62 opened 4 years ago by mhesselbarth
  1

• Do I need a shared directory when using a batchtools_slurm plan?

  #60 opened 4 years ago by yimyom
  2

• Odd problem running on SGE cluster

  #54 opened 4 years ago by rimorob
  9

• Setting export compression

  #53 opened 4 years ago by benmarchi
  4

• WISH: Update the default to use a finite number of HPC workers

  #57 opened 4 years ago by HenrikBengtsson
  0

• WISH: Limit default number of workers (instead of +Inf)

  #52 opened 4 years ago by HenrikBengtsson
  0

• Add argument to control the working directory of the batchtools registry

  #56 opened 4 years ago by HenrikBengtsson
  0

• TESTS: Don't use local temp folder for HPC backends

  #55 opened 4 years ago by HenrikBengtsson
  5

• Listing of jobs failed (exit code 127); qstat command not found

  #51 opened 5 years ago by nick-youngblut
  2

• singularity support?

  #44 opened 5 years ago by kkmann
  1

• Error: BatchtoolsExpiration: Future ('<none>')

  #48 opened 5 years ago by nick-youngblut
  1

• rscript object missing under nested future topology (login->cluster->session)

  #46 opened 5 years ago by coatless
  3

• Jobs are submitted succesfully, but only runs on head node

  #50 opened 5 years ago by majorbytes
  2

• BUG: Odd interaction with BatchJobs package

  #49 opened 5 years ago by HenrikBengtsson
  0

• CHECKS: Remove folder .future/ created by R CMD check

  #47 opened 5 years ago by HenrikBengtsson
  0

• Problem with slurm backend when calling scancel

  #45 opened 5 years ago by statquant
  2

• Failed to load package error

  #42 opened 5 years ago by statquant
  9

• Loading back results from workers to the master process

  #43 opened 5 years ago by statquant
  1

• Cannot get toy example to work, could you kindly guide me for config ?

  #41 opened 5 years ago by statquant
  3