sge

There are 81 repositories under sge topic.

  • nextflow

    nextflow-io/nextflow

    A DSL for data-driven computational pipelines

    Language:Groovy2.7k883.3k628

  • implus/PytorchInsight

    a pytorch lib with state-of-the-art architectures, pretrained models and real-time updated results

    Language:Python8602340123

  • mllg/batchtools

    Tools for computation on batch systems

    Language:R1721022551

  • mschubert/clustermq

    R package to send function calls as jobs on LSF, SGE, Slurm, PBS/Torque, or each via SSH

    Language:R146827027

  • HenrikBengtsson/future.batchtools

    :rocket: R package future.batchtools: A Future API for Parallel and Distributed Processing using batchtools

    Language:R844859

  • qtop/qtop

    qtop (pronounced queue-top) is a tool written in order to monitor the state of Queueing Systems, along with related information relevant on HPC & grid clusters. At present it supports **PBS, SGE & OAR** families. There is a historic reference for the prior shell version of the tool, at former CERN source:

    Language:Python37514223

  • datasnakes/OrthoEvolution

    An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

    Language:Python294644

  • baiyongan/lsf-handbook

    IBM LSF manual translation and practical experience

    Language:HTML26228

  • GarrettJenkinson/informME

    An information-theoretic pipeline for methylation analysis of WGBS data

    Language:MATLAB255118

  • pyiron/pysqa

    Simple HPC queuing system adapter for Python on based jinja templates to automate the submission script creation.

    Language:Python226307

  • FlyPythons/DAGflow

    Module to create DAG Task and Manage Task on SGE

    Language:Python21325

  • wangkaisine/SGE-On-CentOS

    Intro how to install and use SGE(Sun Grid Engine) on ConteOS 7

    19229

  • hpc-gridware/clusterscheduler

    A drop-in replacement of #SunGridEngine (SGE) or #UnivaGridEngine (UGE) with modern features, stable, and ultra-fast.

    Language:C++18202

  • HECBioSim/Longbow

    Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.

    Language:Python176913

  • relleums/qstat

    parse Grid Engine qstat job info list into a list of python dicts

    Language:Python12243

  • adigorla/xgap

    xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from next-generation DNA sequencing data.

    Language:Python10102

  • yodeng/runjob

    runjob is a program for managing a group of related jobs running on a compute cluster

    Language:Python10204

  • zenotech/MyCluster

    Utilities to support interacting with multiple HPC clusters

    Language:Python108123

  • dgruber/jsv

    Grid Engine JSV (Job Submission Verifier) implementation for Go (#golang).

    Language:Go9617

  • HenrikBengtsson/future.clustermq

    :rocket: R package future.clustermq: A Future API for Parallel Processing using 'clustermq'

    Language:R9432

  • HenrikBengtsson/future.BatchJobs

    :rocket: R package: future.BatchJobs: A Future API for Parallel and Distributed Processing using BatchJobs [Intentionally archived on CRAN on 2021-01-08]

    Language:R8579

  • zengxiaofei/PJM

    A simple job manager for PBS (Portable Batch System)

    Language:Python8300

  • fieldtrip/qsub

    This repository contains a subset of the FieldTrip code related to distributed computing

    Language:MATLAB6301

  • NYU-Molecular-Pathology/util

    Utility modules for Python

    Language:Python6302

  • zengxiaofei/snodes

    Some scripts for managing nodes and jobs on SGE

    Language:Python6300

  • blitzcti/sgecti

    Sistema de Gerenciamento de Estágio - Blitz - CTI

    Language:HTML5100

  • CarragherLab/cptools2

    Running cellprofiler on eddie3 / SGE clusters

    Language:Python42332

  • datasnakes/htseq-count-cluster

    A cli for running multiple qsub jobs with HTSeq's htseq-count on a cluster.

    Language:Python4390

  • indigo-dc/bdocker

    Execution and management of Docker containers in batch systems.

    Language:Python41120

  • hpc-gridware/go-clusterscheduler

    Simple Go API wrapping Open Cluster Schedulers cli

    Language:Go3100

  • jrhawley/Terminal

    Custom terminal setup for Linux and Mac

    Language:Shell3401

  • prehensilecode/pydrmaa2

    Python DRMAA2 interface using SWIG

    Language:Makefile3411

  • prod-feng/sge-gpu

    Patch files for SGE, Grid Engine, built-in support for multiple GPUs scheduling, set CUDA_VISIBLE_DEVICES for jobs, no load sensor needed

    3210

  • TheRoddyWMS/BatchEuphoria

    A library to access different kinds of cluster backends

    Language:Groovy311745
  • SGE

    canarydev/SGE

    Sistema de Gestión Empresarial 📊 | Odoo | Lecciones y recursos educativos

    Language:Shell2

  • yodeng/qsubwt

    Simple wrapper for qsub which provides the functionality of the '-sync' option

    Language:Python2200