Pinned Repositories
bam-readcount
count DNA sequence reads in BAM files
beamerthemeZBlue
A professional beamerposter theme for science conferences.
bioconda-recipes
Conda recipes for the bioconda channel.
cellassign
Automated, probabilistic assignment of cell types in scRNA-seq data
cellassign-paper
Analysis pipelines for cellassign manuscript
clonal-lohhla
Subclonal determination of HLA LOH
copynumber
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/copynumber.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=copynumber.
cs540-project
CPSC 540 project
graspods_scrnaseq_clustering_tutorial
Dimensionality reduction, clustering, and differential expression tutorial using single-cell RNA-seq data
Irrationone's Repositories
Irrationone/cellassign
Automated, probabilistic assignment of cell types in scRNA-seq data
Irrationone/clonal-lohhla
Subclonal determination of HLA LOH
Irrationone/beamerthemeZBlue
A professional beamerposter theme for science conferences.
Irrationone/cellassign-paper
Analysis pipelines for cellassign manuscript
Irrationone/graspods_scrnaseq_clustering_tutorial
Dimensionality reduction, clustering, and differential expression tutorial using single-cell RNA-seq data
Irrationone/bam-readcount
count DNA sequence reads in BAM files
Irrationone/bioconda-recipes
Conda recipes for the bioconda channel.
Irrationone/copynumber
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/copynumber.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=copynumber.
Irrationone/cs540-project
CPSC 540 project
Irrationone/cv
Curriculum vitae
Irrationone/DoubletDetection
Doublet detection in single-cell RNA-seq data.
Irrationone/DoubletFinder
R package for detecting doublets in single-cell RNA sequencing data
Irrationone/getopt
R package providing basic command line optional argument parsing
Irrationone/IMonitor
This script use to analyze the immune repertoire sequenced by high throughtput sequencing
Irrationone/mixcr
MiXCR is a universal software for fast and accurate analysis of T- and B- cell receptor repertoire sequencing data.
Irrationone/mtheme
A modern LaTeX Beamer theme
Irrationone/partis
B cell receptor annotation, partitioning, and simulation
Irrationone/phyextended
A git repository for Christoph Heibl phyloch R package
Irrationone/pmsignature
R package for extracting mutation signatures from a list of somatic mutations
Irrationone/R_optimization_tutorial
Irrationone/revbayes
Irrationone/rust-htslib
This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.
Irrationone/rust-pseudoaligner
Single-Cell RNA-seq pseudo-aligner
Irrationone/scHLAcount
Count HLA alleles in single-cell RNA-seq data
Irrationone/scvis
R wrapper for scvis library
Irrationone/seurat
R toolkit for single cell genomics
Irrationone/splatter
Simple simulation of single-cell RNA sequencing data
Irrationone/STAT540-UBC.github.io
Public repository of STAT540@University of British Columbia. Statistical Methods for High Dimensional Biology
Irrationone/toil
A scalable, efficient, cross-platform and easy-to-use workflow engine in pure Python
Irrationone/xcrmapscape
Quick combination of maiasmith's mapscape and circosJS