JMHumphreys

JMHumphreys's Stars

• r-lib/actions

  GitHub Actions for the R community

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• pbs-assess/sdmTMB

  :earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB

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• stan-dev/loo

  loo R package for approximate leave-one-out cross-validation (LOO-CV) and Pareto smoothed importance sampling (PSIS)

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• jgabry/bayes-workflow-book

  Source files for the book "Bayesian Workflow Using Stan"

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• jg-you/noisy-networks-measurements

  Noisy network measurement with stan

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• CDCgov/wastewater-informed-covid-forecasting

  Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub

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• nicholasjclark/physalia-forecasting-course

  Ecological forecasting using Dynamic Generalized Additive Models with R 📦's {mvgam} and {brms}

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• mrc-ide/epireview

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• mrc-ide/skygrowth

  Phylodynamic inference

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• sarahhbellum/NobBS

  Nowcasting by Bayesian Smoothing

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• CDCgov/PyRenew

  Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.

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• ElliotDovers/scampr

  Spatially Correlated, Approximate Modelling of Point patterns in R

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• athowes/thesis

  Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD, Imperial College London, 2023)

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• CDCgov/cfa-gam-rt

  R package for real-time Rt estimation with penalized splines

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• CDCgov/measles-model-chicago-2024

  Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Illinois, 2024", MMWR (2024)

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• WardBrian/stan-web-demo

  Stan, compiled to Webassembly, running in your browser!

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• gqlNU/publicWW

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• JudithBouman2412/HETTMO

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• dnncode/Spatio-Temporal-Model-for-SPDE

  Statistical Modeling for Spatio-Temporal Data from Physical Convection-Diffusion Processes

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• Anni-Yang/ctmm-interaction

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• machado-lab/ASF-model

  This repository host the codes for the model develop and presented herehttps://www.biorxiv.org/content/10.1101/2021.04.05.438400v1.abstract

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• AmyHudson/MonarchsJetStream

  Here I examine Monarch overwintering acreage as influenced by regional climate factors characterized by the jet stream

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• joshuablake/thesis

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• AlbaFuster/Fuster-Alonso-et-al.-2023

  In this repository we present the code to reproduce our manuscript "Accounting for spatio-temporal and sampling dependence in relative biomass and CPUE indices: simulation and modeling framework".

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• AmyHudson/wind-midge-dispersal

  Exploring wind dispersal of biting midges for application in disease ecology

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• JBelmont89/Occupancy-Models-in-INLA

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