Pinned Repositories
sabatini-datajoint-pipeline
element-array-ephys
DataJoint Element for Neuropixels analysis with Kilosort
workflow-array-ephys
Example DataJoint workflow for Neuropixels analysis with Kilosort
aeon_mecha
Project Aeon's main library for interfacing with acquired data. Contains modules for file io, data querying and qc.
bctpy
brain connectivity toolbox for python
BioSPPy
Biosignal Processing in Python
monkey-dj
firefly-monkey datajoint schema
pyfinch
Python package for analyzing avian neural & bioacoustics signals
MedSDoH
SDoH annotation project
aeon_mecha
Project Aeon's main library for interfacing with acquired data. Contains modules for raw data file io, data querying, data processing, data qc, database ingestion, and building computational data pipelines.
JaerongA's Repositories
JaerongA/pyfinch
Python package for analyzing avian neural & bioacoustics signals
JaerongA/aeon_mecha
Project Aeon's main library for interfacing with acquired data. Contains modules for file io, data querying and qc.
JaerongA/element-array-ephys
DataJoint Element for Neuropixels analysis with Kilosort
JaerongA/sciops-dev_sabatini
JaerongA/AgingNLP
JaerongA/AI-Scientist
The AI Scientist: Towards Fully Automated Open-Ended Scientific Discovery 🧑🔬
JaerongA/bark
🔊 Text-Prompted Generative Audio Model
JaerongA/BiomedGPT
BiomedGPT: A Generalist Vision-Language Foundation Model for Diverse Biomedical Tasks
JaerongA/CommonDataModel
Definition and DDLs for the OMOP Common Data Model (CDM)
JaerongA/datajoint-python
Relational data pipelines for the science lab
JaerongA/DataQualityDashboard
A tool to help improve data quality standards in observational data science.
JaerongA/datasets
🤗 The largest hub of ready-to-use datasets for ML models with fast, easy-to-use and efficient data manipulation tools
JaerongA/dbgate
Database manager for MySQL, PostgreSQL, SQL Server, MongoDB, SQLite and others. Runs under Windows, Linux, Mac or as web application
JaerongA/DeepSeek-R1
JaerongA/element-event
DataJoint Element for event-based behavior experiments
JaerongA/element-interface
Common functions for the DataJoint Elements
JaerongA/grobid
A machine learning software for extracting information from scholarly documents
JaerongA/IAA_Calculator
JaerongA/intanrhdreader
Python reader for .rhd data files
JaerongA/MedTator
A Serverless Text Annotation Tool for Corpus Development
JaerongA/mne-python
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
JaerongA/nlp_project_template
A template repository for NLP projects
JaerongA/OpenDevin
🐚 OpenDevin: Code Less, Make More
JaerongA/paper-qa
High accuracy RAG for answering questions from scientific documents with citations
JaerongA/probeinterface
Python package to handle probe layout, geometry and wiring to device.
JaerongA/prophet
Tool for producing high quality forecasts for time series data that has multiple seasonality with linear or non-linear growth.
JaerongA/rosettasciio
Python library for reading and writing scientific data format
JaerongA/SDoHTagger
SDoH annotation project
JaerongA/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
JaerongA/spyglass
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF