Jhsmit

Jhsmit's Stars

• microsoft/generative-ai-for-beginners

  21 Lessons, Get Started Building with Generative AI 🔗 https://microsoft.github.io/generative-ai-for-beginners/

  Language:Jupyter Notebook66k56713134k

• black-forest-labs/flux

  Official inference repo for FLUX.1 models

  Language:Python18.8k15901.3k

• PrefectHQ/prefect

  Prefect is a workflow orchestration framework for building resilient data pipelines in Python.

  Language:Python17.9k1655.8k1.7k

• Doriandarko/claude-engineer

  Claude Engineer is an interactive command-line interface (CLI) that leverages the power of Anthropic's Claude-3.5-Sonnet model to assist with software development tasks.This framework enables Claude to generate and manage its own tools, continuously expanding its capabilities through conversation. Available both as a CLI and a modern web interface

  Language:Python10.5k1431371.1k

• mshumer/gpt-prompt-engineer

  Language:Jupyter Notebook9.4k8530648

• penrose/penrose

  Create beautiful diagrams just by typing notation in plain text.

  Language:TypeScript7.6k119757350

• skorch-dev/skorch

  A scikit-learn compatible neural network library that wraps PyTorch

  Language:Jupyter Notebook5.9k81517393

• AnswerDotAI/fasthtml

  The fastest way to create an HTML app

  Language:Jupyter Notebook5.8k52357247

• yamadashy/repopack

  📦 Repopack is a powerful tool that packs your entire repository into a single, AI-friendly file. Perfect for when you need to feed your codebase to Large Language Models (LLMs) or other AI tools like Claude, ChatGPT, and Gemini.

  Language:TypeScript2.9k1531136

• patrick-kidger/diffrax

  Numerical differential equation solvers in JAX. Autodifferentiable and GPU-capable. https://docs.kidger.site/diffrax/

  Language:Python1.5k23355136

• evo-design/evo

  Biological foundation modeling from molecular to genome scale

  Language:Jupyter Notebook1.2k2360150

• predict-idlab/plotly-resampler

  Visualize large time series data with plotly.py

  Language:Python1.1k1716970

• Ligo-Biosciences/AlphaFold3

  Open source implementation of AlphaFold3

  Language:Python945221384

• henrikbostrom/crepes

  Python package for conformal prediction

  Language:Python46942135

• gpufit/Gpufit

  GPU-accelerated Levenberg-Marquardt curve fitting in CUDA

  Language:C++3162010995

• manzt/quak

  a scalable data profiler

  Language:TypeScript26492212

• opencobra/optlang

  optlang - sympy based mathematical programming language

  Language:Python2551812553

• jupyter-widgets/jupyterlab-sidecar

  A sidecar output widget for JupyterLab

  Language:TypeScript252153739

• adaptyvbio/ProteinFlow

  Versatile computational pipeline for processing protein structure data for deep learning applications.

  Language:Python24581717

• amyxlu/cheap-proteins

  Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http://bit.ly/cheap-proteins

  Language:Python98357

• timschneeb/KomootGPX

  Download Komoot tracks and highlights as GPX files (including metadata). Supports bulk-download

  Language:Python90596

• gngdb/pytorch-minimize

  Use scipy.optimize.minimize as a PyTorch Optimizer.

  Language:Python672311

• kiharalab/DiffModeler

  DiffModeler: a diffusion model based protein complex structure modeling tool.

  Language:Python41374

• morgannprice/PaperBLAST

  PaperBLAST: find papers about a protein or its homologs

  Language:Perl382186

• PeptoneLtd/proteinmpnn_ddg

  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.

  Language:Python37115

• pmocz/finitedifference-python

  Finite Difference simulation of the Wave Equation (Double-slit experiment)

  Language:Python2210

• AndrewGYork/gfp_magnetofluorescence

  A scientific publication that describes a simple, nontoxic, biocompatible way to control the brightness of fluorescent proteins via modest magnetic fields (~10 mT).

  Language:HTML16200

• gianthk/alrecon

  Tomography reconstruction Web App that keeps non-expert users in mind

  Language:Python41180

• panos158/StructureBasedAnnotation

  This repository includes relevant code and data that were part of my Master's thesis named: Structure-based functional annotation of phage peptides

  Language:Python2

• lucl13/bayesian_hdx

  Support code for HDX data reduction

  Language:Python10