JihedC
I am a French 🇫🇷 living in the Netherlands 🇳🇱. I am bioinformatician interested in machine learning methods and eager to discover/use new technologies!
The Netherlands
Pinned Repositories
ATAC-seq_tomato_SL4.0
Repository containing the analysis tomato ATAC-seq with SL4.0
ATAC_seq_singularity
Repository for the Snakemake ATAC-seq pipeline, using singularity to run
Bioarchive_Morc3
ChIP-seq-analysis
ChIP-seq analysis notes from Tommy Tang
chip-seq-pipeline
ENCODE Uniform processing pipeline for ChIP-seq
ChIP_seq_PE_Snakemake
This repository will contain a Snakemake pipeline for the analysis of PE ChIP-seq data (v.2020)
ChIP_seq_SE_Snakemake
Pipeline for the analysis of Single-end ChIP-seq data
ChIP_seq_singularity
Snakemake ChIP-seq pipeline with singularity
Classify_gene_annotation
test classify tomato Mbp
RNA_seq_singularity
JihedC's Repositories
JihedC/ChIP_seq_PE_Snakemake
This repository will contain a Snakemake pipeline for the analysis of PE ChIP-seq data (v.2020)
JihedC/ATAC-seq_tomato_SL4.0
Repository containing the analysis tomato ATAC-seq with SL4.0
JihedC/ATAC_seq_singularity
Repository for the Snakemake ATAC-seq pipeline, using singularity to run
JihedC/Bioarchive_Morc3
JihedC/chip-seq-pipeline
ENCODE Uniform processing pipeline for ChIP-seq
JihedC/ChIP_seq_SE_Snakemake
Pipeline for the analysis of Single-end ChIP-seq data
JihedC/ChIP_seq_singularity
Snakemake ChIP-seq pipeline with singularity
JihedC/Classify_gene_annotation
test classify tomato Mbp
JihedC/RNA_seq_singularity
JihedC/Snakemake_ATAC_2020
Repository for Jianhui's snakemake pipeline
JihedC/DMC1_ChIP
Files related to DMC1 ChIP-seq analysis
JihedC/Docker_recipes
Repo containing recipes for the docker container I made
JihedC/dotfiles
Default configuration for Le Wagon's students
JihedC/Intervene
This repository will contain all the intervene comparison between genomic loci
JihedC/JihedC
My personal repository
JihedC/myproject
JihedC/planets
JihedC/rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
JihedC/RNA_seq_snakemake_singularity
Snakemake workflow for the analysis of RNA-seq data
JihedC/sc_RNA-seq
JihedC/sc_RNA_seq
snakemake single cell RNA-seq pipeline
JihedC/setup
JihedC/singularity
JihedC/Snakemake_ChIP_seq
JihedC/Snakemake_ChIP_seq_pipeline
Repository containing a Snakemake ChIPseq pipeline for SE and PE datasets
JihedC/Snakemake_deeptools
Repository for Snakemake deeptools
JihedC/Snakemake_RRBS
Snakemake pipeline for the analysis of RRBS data
JihedC/studyGroup
Gather together a group to skill-share, co-work, and create community
JihedC/taxifare-website
JihedC/test_trackhub