LINCellularNeuroscience/VAME

Issues

• vame.egocentric_alignment - array of sample points is empty

  #112 opened 10 months ago by SusanL82
  2

• alignment egocentric

  #144 opened 12 days ago by deepak199010
  0

• Do anyone know where could I fix the fps value? I am not sure how to open the .egg file

  #141 opened 2 months ago by Weinihsiang
  0

• Vame.community_analysis() issues

  #140 opened 2 months ago by DmitryKishkinev
  0

• vame.train_model() GPU was not found...proceeding with CPU

  #138 opened 3 months ago by lpereiras17
  0

• VAME Question

  #136 opened 5 months ago by kritgrover
  0

• vame.train_model() stuck

  #135 opened 5 months ago by kritgrover
  0

• Clarifying the link between zdim and n_clusters

  #134 opened 5 months ago by DmitryKishkinev
  1

• vame.egocentic alignment specifying video path - UnboundLocalError

  #133 opened 6 months ago by EdH66
  2

• Still having issues with vame.community()

  #89 opened 2 years ago by aGad117
  7

• Colab training issue

  #108 opened a year ago by jelrod14
  4

• yaml and setup files issue

  #129 opened 9 months ago by akesner1
  1

• Command 'config' not found

  #131 opened 8 months ago by hdsliu
  0

• vame.evaluate_model() Output Explanation

  #132 opened 8 months ago by Nike-Nay
  0

• Multi-Animal CSV format

  #127 opened 8 months ago by Nike-Nay
  3

• input csv 'frames' vs video frames

  #130 opened 9 months ago by akesner1
  0

• Making VAME compatible with SLEAP?

  #114 opened a year ago by juliagorman
  6

• Run project without copying videos?

  #124 opened 10 months ago by SusanL82
  1

• Dimension of latent space

  #128 opened 9 months ago by ask5898
  2

• Problem with pose segmentation (slow? stuck?)

  #126 opened 9 months ago by SusanL82
  0

• Finding labels of each frame

  #125 opened 9 months ago by DmitryKishkinev
  0

• Issue with GIF function

  #119 opened a year ago by G-Hepburn
  2

• numba deprecation warnings after importing vame

  #123 opened 10 months ago by SusanL82
  0

• Returning error - ValueError: array of sample points is empty after removing values from pose.csv files

  #122 opened 10 months ago by v-moore
  0

• Evaluate model error: "AttributeError: '_SingleProcessDataLoaderIter' object has no attribute 'next'"

  #106 opened a year ago by weberisla
  7

• Resume training from pre-trained model

  #120 opened a year ago by tue132
  0

• vame.community() fail when transition_matrix is 0 in some pairs.

  #118 opened a year ago by chenxinfeng4
  0

• a patch to speed up data processing

  #117 opened a year ago by chenxinfeng4
  1

• spread out Latent space

  #116 opened a year ago by ask5898
  1

• Motif Video generation

  #115 opened a year ago by ask5898
  1

• "check_video=True" throws error

  #109 opened a year ago by roessler-f
  1

• Not finding results npy file

  #113 opened a year ago by jelrod14
  4

• File "<__array_function__ internals>", line 180, in concatenate ValueError: need at least one array to concatenate

  #97 opened a year ago by camaristajp
  5

• csv_to_numpy() got an unexpected keyword argument 'datapath'

  #110 opened a year ago by xiaoli26
  4

• ModuleNotFoundError: No module named 'hmmlearn'

  #111 opened a year ago by SusanL82
  3

• Missing clusters in resulting npy-files

  #107 opened a year ago by roessler-f
  4

• vame.train_model() error- UnboundLocalError

  #105 opened a year ago by samcentanni
  0

• Error occurred when set 'check_video = True' in the egocentric part

  #104 opened a year ago by kailiwu0707
  0

• Error in pose segmentation

  #101 opened 2 years ago by tue132
  3

• VAME First Step Issues

  #93 opened a year ago by sarahy191
  6

• Adding other data to be used in training (e.g. velocity/acceleration)

  #94 opened a year ago by akesner1
  4

• cannot evaluate after training

  #95 opened 2 years ago by chongtianyifa
  1

• GPU not being recognized in new installations

  #96 opened a year ago by akesner1
  4

• frame loss

  #99 opened a year ago by Wulin-Tan
  1

• VAME to multiple videos across conditions.

  #103 opened a year ago by Wulin-Tan
  3

• vame clustering applied to multiple animals or videos

  #102 opened 2 years ago by Wulin-Tan
  3

• training issue on colab

  #98 opened 2 years ago by GergelyTuri
  2

• How to apply model to unseen data

  #90 opened 2 years ago by AliyaAbl
  3

• MotionMapper Comparison in Paper

  #92 opened 2 years ago by shreyask3107
  1

• Code for MotionMapper and MoSeq

  #91 opened 2 years ago by shreyask3107
  6