LTLA

It/Its (ノಠ益ಠ)ノ彡┻━┻

@GenentechSan Francisco

Pinned Repositories

batchelor
Clone of the Bioconductor repository for the batchelor package.
Language:R18 5 477
Counterspell2018
UU: Counter target spell.
Language:TeX80
CppIrlba
A C++ port of the IRLBA algorithm, based on the C code in the R package.
Language:C++10 3 24
knncolle
Collection of KNN algorithms in C++
Language:C++11 4 35
PseudoCount2018
Some thoughts on choosing an appropriate pseudo-count for log-transformation of scRNA-seq counts.
Language:TeX90
scran.chan
A slimmed down version of scran, based on the C++ library of the same name.
Language:R10 3 20
scRNAseq
Clone of the Bioconductor repository for the scRNAseq package.
Language:R22 5 3212
SingleCellThoughts
Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.
Language:TeX44 9 26
TileDBArray
Clone of the Bioconductor repository for the TileDBArray package.
Language:R10 9 90
umappp
UMAP C++ implementation
Language:C++36 4 1015

LTLA's Repositories

LTLA/umappp
UMAP C++ implementation
Language:C++36 4 1015
LTLA/scRNAseq
Clone of the Bioconductor repository for the scRNAseq package.
Language:R22 5 3212
LTLA/batchelor
Clone of the Bioconductor repository for the batchelor package.
Language:R18 5 477
LTLA/CppIrlba
A C++ port of the IRLBA algorithm, based on the C code in the R package.
Language:C++10 3 24
LTLA/scran.chan
A slimmed down version of scran, based on the C++ library of the same name.
Language:R10 3 20
LTLA/scuttle
Clone of the Bioconductor repository for the scuttle package.
Language:R8 5 246
LTLA/BiocSingular
Clone of the Bioconductor repository for the BiocSingular package.
Language:R7 4 131
LTLA/CppWeightedLowess
A standalone C++ implementation of limma::weightedLowess.
Language:C++7 2 04
LTLA/BiocNeighbors
Clone of the Bioconductor repository for the BiocNeighbors package.
Language:C++6 6 1510
LTLA/CppKmeans
C++ port of R's Hartigan-Wong implementation
Language:C++5 2 13
LTLA/ParquetDataFrame
Bioconductor-friendly bindings for Parquet files.
Language:R4 3 0
LTLA/csaw
Clone of the Bioconductor repository for the csaw package.
Language:R3 4 193
LTLA/gesel.js
Client-side gene set queries.
Language:JavaScript3 4 2
LTLA/byteme
C++ utilities for simple buffered inputs.
Language:C++2 3 0
LTLA/metapod
Clone of the Bioconductor repository for the metapod package.
Language:R2 5 1
LTLA/aarand
Aaron's random distributions for C++
Language:C++1 2 02
LTLA/aggregate-demonstrator
Demonstration of how to vendor aggregateAcrossCells
Language:C++1 2 0
LTLA/csawBook
The book of the package.
Language:TeX1 3 2
LTLA/gesel-manuscript
Manuscript for the gesel NPM package.
Language:TeX1 2 0
LTLA/PCAtools
PCAtools: everything Principal Components Analysis
Language:R1 2 01
LTLA/basilisk-manuscript
Manuscript for the basilisk package
Language:TeX2 0
LTLA/emcmake-docker
Docker image for Emscripten + Cmake
Language:Dockerfile2 01
LTLA/LTLA
3 01
LTLA/mumosa
Clone of the Bioconductor repository for the mumosa package.
Language:R3 2
LTLA/powerit
Lightweight C++ library for power iterations
Language:C++2 02
LTLA/Rcpp
Seamless R and C++ Integration
Language:C++1 0
LTLA/reticulate
R Interface to Python
Language:R2 0
LTLA/ScaledMatrix
Clone of the Bioconductor repository for the ScaledMatrix package.
Language:R3 11
LTLA/TrajectoryUtils
Clone of the Bioconductor repository for the TrajectoryUtils package.
Language:R5 22
LTLA/TSCAN
Clone of the Bioconductor repository for the TSCAN package.
Language:R4 13