MASI Lab @ Vanderbilt

Medical-image Analysis and Statistical Interpretation (MASI)

United States of America

Pinned Repositories

3DUX-Net
Language:Python252 2 7933
ALARM
7 10 11
Pandora-WhiteMatterAtlas
6 6 12
PreQual
An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
Language:Python45 1 108
pyPheWAS
MASI Lab Implementation of PheWAS in Python
Language:Python27 7 44
SLANTbrainSeg
Deep Whole Brain Segmentation Using SLANT Method
Language:Python112 13 1432
Synb0-DISCO
Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
Language:Python62 14 7029
SynBOLD-DisCo
Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
Language:Python19 3 44
SynSeg-Net
SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth
Language:Python68 6 317
UNesT
The official Pytorch implementation of UNesT
Language:Python22 3 35

MASI Lab @ Vanderbilt 's Repositories

MASILab/Synb0-DISCO
Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
Language:Python62 14 7029
MASILab/PreQual
An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
Language:Python45 1 108
MASILab/pyPheWAS
MASI Lab Implementation of PheWAS in Python
Language:Python27 7 44
MASILab/UNesT
The official Pytorch implementation of UNesT
Language:Python22 3 35
MASILab/S-EFOV
S-EFOV: Thoracic CT-based Body Composition Analysis with Semantically Extended FOV
13 3 32
MASILab/DeepN4
Language:Jupyter Notebook2 2 01
MASILab/ADSP_AutoQA
Automated QA for ADSP processing
Language:Python1 4 11
MASILab/AtlasToDiffusionReg
singularity to register an atlas to the diffusion space of a subject
Language:Jupyter Notebook1 2 1
MASILab/ES-1400
Language:Python1 2 0
MASILab/MxIF_Registration
Language:Python1 2 00
MASILab/BRAID
BRain Age Identification from Diffusion MRI (BRAID)
Language:Python00
MASILab/DAPI_RegNet
Language:Jupyter Notebook0 2 10
MASILab/Inhale_Exhale_CT
Repo for harmonization of reconstruction kernels on inspiratory, expiratory scans
Language:Jupyter Notebook00
MASILab/ChatRTX
A developer reference project for creating Retrieval Augmented Generation (RAG) chatbots on Windows using TensorRT-LLM
Language:Python
MASILab/Decathlon_wo_Doctorate
Language:Jupyter Notebook2 1
MASILab/dss_fmri_atlas
Diffusion-informed spatial smoothing fMRI atlas
Language:Python3 0
MASILab/fitbir_haca3
HACA3 for harmonizing FITBIR
Language:Python
MASILab/he_stain_translation_cyclegan
Language:Python2 0
MASILab/hovernets_on_vhe
Language:Python2 0
MASILab/influence_of_fusion_on_pancreas_segmentation
Language:Python2 0
MASILab/Informatics_ADSP
Language:Shell2 0
MASILab/lcancer_baselines
Language:Python
MASILab/michael_kim_overview
Overview of all projects by Michael Kim (kimm58)
2 1
MASILab/NerfOrganRecon
How to run code to reconstuct an organ surface from an .mp4 video
Language:Python2 0
MASILab/nnUNet_midl_2024
add custom models
Language:Python
MASILab/nucleus_and_cell_classification_on_he
Classify nuclei/cells on intestinal H&E into 14 different classes
Language:Jupyter Notebook2 0
MASILab/pyPheWAS-phecodex
MASI Lab Implementation of PheWAS in Python, with phecodex
Language:Python
MASILab/Variance-Aging-Diffusion
Language:Jupyter Notebook2 0
MASILab/vss_fmri
Vasculature-informed spatial smoothing for fMRI
Language:Python
MASILab/WM_fMRI_atlas_Yang
2 0