MASI Lab @ Vanderbilt
Medical-image Analysis and Statistical Interpretation (MASI)
United States of America
Pinned Repositories
3DUX-Net
ALARM
Pandora-WhiteMatterAtlas
PreQual
An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
pyPheWAS
MASI Lab Implementation of PheWAS in Python
SLANTbrainSeg
Deep Whole Brain Segmentation Using SLANT Method
Synb0-DISCO
Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
SynBOLD-DisCo
Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
SynSeg-Net
SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth
UNesT
The official Pytorch implementation of UNesT
MASI Lab @ Vanderbilt 's Repositories
MASILab/SLANTbrainSeg
Deep Whole Brain Segmentation Using SLANT Method
MASILab/Synb0-DISCO
Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
MASILab/PreQual
An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
MASILab/pyPheWAS
MASI Lab Implementation of PheWAS in Python
MASILab/UNesT
The official Pytorch implementation of UNesT
MASILab/S-EFOV
S-EFOV: Thoracic CT-based Body Composition Analysis with Semantically Extended FOV
MASILab/SynBOLD-DisCo
Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
MASILab/cornn_tractography
Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
MASILab/deform-uxnet
MASILab/lmsignatures
MASILab/DeepLungScreening
MASILab/MaCRUISE
MASILab/AtlasToDiffusionReg
singularity to register an atlas to the diffusion space of a subject
MASILab/DAPIArtifactRemoval
MASILab/ADSP_AutoQA
Automated QA for ADSP processing
MASILab/atlas_surface_rendering
Generate a surface to show the deformation from registering subjects to an atlas
MASILab/cellNN
MASILab/ChatRTX
A developer reference project for creating Retrieval Augmented Generation (RAG) chatbots on Windows using TensorRT-LLM
MASILab/deedsBCV_multimodal_mri
Forked to include pre and post processing to enable registration of abdominal T1 and T2 MRI. Both of these modlaities are differently anisotropic. These modifications allow for deeds deformably registered moving image to align with the unaltered anisotropic fixed image.
MASILab/DeepN4
MASILab/dss_fmri_atlas
Diffusion-informed spatial smoothing fMRI atlas
MASILab/he_stain_translation_cyclegan
MASILab/hovernets_on_vhe
MASILab/Informatics_ADSP
MASILab/michael_kim_overview
Overview of all projects by Michael Kim (kimm58)
MASILab/nnUNet_midl_2024
add custom models
MASILab/nucleus_and_cell_classification_on_he
Classify nuclei/cells on intestinal H&E into 14 different classes
MASILab/Variance-Aging-Diffusion
MASILab/vss_fmri
Vasculature-informed spatial smoothing for fMRI
MASILab/WM_fMRI_atlas_Yang