MASI Lab @ Vanderbilt
Medical-image Analysis and Statistical Interpretation (MASI)
United States of America
Pinned Repositories
3DUX-Net
ALARM
Pandora-WhiteMatterAtlas
PreQual
An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
pyPheWAS
MASI Lab Implementation of PheWAS in Python
SLANTbrainSeg
Deep Whole Brain Segmentation Using SLANT Method
Synb0-DISCO
Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
SynBOLD-DisCo
Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
SynSeg-Net
SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth
UNesT
The official Pytorch implementation of UNesT
MASI Lab @ Vanderbilt 's Repositories
MASILab/3DUX-Net
MASILab/SLANTbrainSeg
Deep Whole Brain Segmentation Using SLANT Method
MASILab/SynBOLD-DisCo
Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
MASILab/deform-uxnet
MASILab/cornn_tractography
Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
MASILab/S-EFOV
S-EFOV: Thoracic CT-based Body Composition Analysis with Semantically Extended FOV
MASILab/RepUX-Net
MASILab/lmsignatures
MASILab/MaCRUISE
MASILab/DeepLungScreening
MASILab/STrUDeL
Streamline Tractography Utilities for Deep Learning
MASILab/DAPIArtifactRemoval
MASILab/Organ_Surface_Rendering
MASILab/masimrs
2D PRESS MRSI Processing for Philips Enhanced DICOM and Siemens DICOM data with LCModel
MASILab/atlas_surface_rendering
Generate a surface to show the deformation from registering subjects to an atlas
MASILab/cellNN
MASILab/CycleGAN-on-Connectomics
Image-to-Image Translation in PyTorch
MASILab/deedsBCV_multimodal_mri
Forked to include pre and post processing to enable registration of abdominal T1 and T2 MRI. Both of these modlaities are differently anisotropic. These modifications allow for deeds deformably registered moving image to align with the unaltered anisotropic fixed image.
MASILab/DeepCAC
Fully automatic coronary calcium risk assessment using Deep Learning.
MASILab/dev_eamon
Easy-to-use,Modular and Extendible package of deep-learning based CTR models .
MASILab/francois_special_spider
MASILab/gradtensor
MASILab/MultipathKernelConverisonCycleGAN_Pytorch
Image-to-Image Translation in PyTorch
MASILab/parseXNAT_Nazirah
MASILab/RandomWalkSlidingWindow
Alleviating tiling effect by random walk sliding window in high-resolution histological whole slide image synthesis.
MASILab/segment-anything
The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
MASILab/segment-anything-lucas
The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
MASILab/stable-diffusion-lung-CT
Explore conditional image generation in medical domain using stable diffusion
MASILab/SurfaceRegistration
MASILab/WM_fMRI_atlas_Yang