Pinned Repositories
ensembl-scripts
Simple Ensembl scripts
custom_compara_hmm
Simple pipeline to generate an hmm library from a compara database
EBI-nextflow-config
EBI-wide Nextflow config file
eg-trackhub
A Perl API to create track hubs and interface with the Track Hub Registry.
eg-web-common
modules/files required to set up any of the EG genome browsers
eg-web-metazoa
modules required to set up EG Metazoa mirror
eg-web-vectorbase
modules required to set up a VectorBase genome browser
ensembl
The Ensembl Core Perl API and SQL schema
ensembl-analysis
Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines
ensembl-compara
The Ensembl Compara Perl API and SQL schema
MatBarba's Repositories
MatBarba/ensembl-py
Python Ensembl code source repository
MatBarba/ensembl-utils
Ensembl python utils
MatBarba/ensembl-scripts
Simple Ensembl scripts
MatBarba/ensembl-production
Ensembl Production code
MatBarba/ensembl-datacheck
Code for checking Ensembl databases during release production
MatBarba/ensembl-hive
EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource
MatBarba/ensembl-genes-nf
Ensembl Genebuild NextFlow pipelines
MatBarba/EBI-nextflow-config
EBI-wide Nextflow config file
MatBarba/new_genome_loader
MatBarba/ensembl-production-imported
Production pipelines used by data-teams to process imported genomes (former EnsemblGenomes pipelines)
MatBarba/ensembl-variation
The Ensembl Variation Perl API and SQL schema
MatBarba/ensembl-analysis
Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines
MatBarba/vb-rnaseqdb
MatBarba/custom_compara_hmm
Simple pipeline to generate an hmm library from a compara database
MatBarba/eg-web-vectorbase
modules required to set up a VectorBase genome browser
MatBarba/vb_splicer
MatBarba/ensembl-rest
Language agnostic RESTful data access to Ensembl data over HTTP
MatBarba/ensembl-compara
The Ensembl Compara Perl API and SQL schema
MatBarba/ensembl-webcode
The code to run an Ensembl website
MatBarba/eg-web-metazoa
modules required to set up EG Metazoa mirror
MatBarba/eg-web-common
modules/files required to set up any of the EG genome browsers
MatBarba/eg-trackhub
A Perl API to create track hubs and interface with the Track Hub Registry.
MatBarba/homebrew-cask
Meta formulas for homebrew/linuxbrew
MatBarba/ensembl
The Ensembl Core Perl API and SQL schema
MatBarba/ensembl-funcgen
Ensembl Funcgen Perl API and SQL schema