git clone https://github.com/MichaelSebero/Y-Haplogroup-Predictor
python3 /path/to/y-haplogroup-predictor.py
Y-Haplogroup-Predictor detects SNPs associated with haplogroups when provided raw DNA data which is formatted in rsID format. This script calculates which SNPs are the most prevalent in a sample and decides the haplogroup.
The intention of this software is to provide a FOSS alternative to detecting haplogroups. Databreaches occur often and institutions shouldn't be trusted with processing / storing client genetic data over a long period of time. Y-Haplogroup-Predictor is completely private and can be ran offline without sending PIA to a website.
- Aquire a copy of your DNA data from a genetic testing platform.
- Open up the DNA file and make sure it's formatted in rsID format.
The script looks for the rsid and genotype to determine results.
rsid chromosome position allele1 allele2
rs17250535 24 22739367 T T
- Input the raw DNA file pathway into the console.
This script only detects SNPs associated with haplogroups R1a, R1b, I1 and I2, along with their subclades for now.
