Microbion

Pinned Repositories

VirSorter2
customizable pipeline to identify viral sequences from (meta)genomic data
Language:Python217 4 21028
PhaBOX
Local version of the phage identification and analysis web server (tool set)
Language:Python32 3 232
2022-Conversion-of-steppe-to-agriculture
R code for analyses in the manuscript "Conversion of steppe to agriculture increases spatial heterogeneity of soil functional genes"
Language:R0 1 00
2024-Reduced-Tillage-Improves-Soil-Functional-Profiles
R scripts for article "Soil metagenomics reveals reduced tillage improves soil functional profiles of carbon, nitrogen, and phosphorus cycling in bulk and rhizosphere soils"
Language:R00
collections
record inspirations and readings
0 1 00
docker-stacks
Ready-to-run Docker images containing Jupyter applications
Language:Python0 0 00
jupyterhub-deploy-docker-localhost
Jupyter Notebook set up for GEEKS Digital Case Studies
Language:Jupyter Notebook0 0 00
dolphinnext-tutorial
DolphinNext Tutorial documents
5 2 215
funcscan
(Meta-)genome screening for functional and natural product gene sequences
Language:Nextflow70 91 14620
What_the_Phage
WtP: Phage identification via nextflow and docker or singularity
Language:Nextflow103 7 15115

Microbion's Repositories

Microbion/2022-Conversion-of-steppe-to-agriculture
R code for analyses in the manuscript "Conversion of steppe to agriculture increases spatial heterogeneity of soil functional genes"
Language:R0 1 00
Microbion/2024-Reduced-Tillage-Improves-Soil-Functional-Profiles
R scripts for article "Soil metagenomics reveals reduced tillage improves soil functional profiles of carbon, nitrogen, and phosphorus cycling in bulk and rhizosphere soils"
Language:R00
Microbion/collections
record inspirations and readings
0 1 00
Microbion/docker-stacks
Ready-to-run Docker images containing Jupyter applications
Language:Python0 0 00
Microbion/jupyterhub-deploy-docker-localhost
Jupyter Notebook set up for GEEKS Digital Case Studies
Language:Jupyter Notebook0 0 00