MolGen

MolGen's Stars

• PAIR-code/saliency

  Framework-agnostic implementation for state-of-the-art saliency methods (XRAI, BlurIG, SmoothGrad, and more).

  Language:Jupyter Notebook9502437191

• Lasagne/Recipes

  Lasagne recipes: examples, IPython notebooks, ...

  Language:Python9145266419

• lucasjinreal/keras_frcnn

  Keras Implementation of faster-rcnn

  Language:Python5211079278

• abidlabs/deep-learning-genomics-primer

  Contains files for the deep learning in genomics primer.

  Language:Jupyter Notebook2608463

• tbepler/protein-sequence-embedding-iclr2019

  Source code for "Learning protein sequence embeddings using information from structure" - ICLR 2019

  Language:Python253112575

• BIMSBbioinfo/janggu

  Deep learning infrastructure for genomics

  Language:Jupyter Notebook252203133

• vanessajurtz/lasagne4bio

  Language:Jupyter Notebook10610236

• kyu999/biovec

  A new approach for representing biological sequences

  Language:Python987932

• daquang/YAMDA

  Yet Another Motif Discovery Algorithm

  Language:Python51797

• kundajelab/genomelake

  Simple and efficient access to genomic data for deep learning models.

  Language:Python4314817

• lcolladotor/derfinder

  Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches

  Language:R42243215

• uci-cbcl/FactorNet

  A deep learning package for predicting TF binding

  Language:Python4114311

• broadinstitute/dsde-deep-learning

  DSDE Deep Learning Club

  Language:Python405069

• abidlabs/AtomsOfDeepLearning

  Simple Experiments to Give Some Intuition behind Deep Neural Networks

  Language:Jupyter Notebook355015

• ehsanasgari/dimotif

  Alignment-free Protein Motif Miner

  Language:HTML16214

• igemsoftware2017/AiGEM_TeamHeidelberg2017

  The AiGEM software suite of Team Heidelberg 2017

  Language:Python156117

• multicom-toolbox/DeepSF

  Deep convolutional neural network for mapping protein sequences to folds

  Language:Perl8515

• uci-cbcl/RBPnet

  Language:Python11000