Natpod

Natpod's Stars

• jbhuang0604/awesome-computer-vision

  A curated list of awesome computer vision resources

  21.2k1.2k264.2k

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.3k24923994

• pykeen/pykeen

  🤖 A Python library for learning and evaluating knowledge graph embeddings

  Language:Python1.7k27555191

• anuragxel/salt

  Segment Anything Labelling Tool

  Language:Python1k837125

• sib-swiss/training-collection

  Collection of bioinformatics training materials

  Language:Python9924568183

• HenriquesLab/ZeroCostDL4Mic

  ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy

  Language:Jupyter Notebook57234216132

• GT4SD/gt4sd-core

  GT4SD, an open-source library to accelerate hypothesis generation in the scientific discovery process.

  Language:Jupyter Notebook3411710274

• kpatel427/YouTubeTutorials

  Language:R2981012131

• deanslee/FigureOneLab

  Hone computational biology skills by re-enacting Figure 1 of modern biology papers

  Language:Jupyter Notebook19413144

• jokergoo/InteractiveComplexHeatmap

  Make Interactive Complex Heatmaps

  Language:R1301111424

• ncbi/AIONER

  AIONER

  Language:Python4615412

• marrlab/InstantDL

  InstantDL: An easy and convenient deep learning pipeline for image segmentation and classification

  Language:Python425148

• OlgaVT/Alternative-Splicing-Tools

  A list of alternative splicing analysis resources

  37406

• OceanGenomics/mudskipper

  A tool for projecting genomic alignments to transcriptomic coordinates

  Language:Rust356258

• mazzalab/fastqwiper

  An ensemble method to recover corrupted FASTQ files, drop or fix pesky lines, remove unpaired reads, and settle reads interleaving.

  Language:Python251243

• beiko-lab/arete

  AMR/VF LGT focused bacterial genomics analysis workflow

  Language:Python242757

• dongxuemin666/RNA-combine

  RNA-seq data comprehensive data analysis toolbox

  Language:Python191010

• sib-swiss/multiomics-data-analysis-and-integration-training

  Language:HTML16416

• cwieder/PathIntegrate

  PathIntegrate Python package for pathway-based multi-omics data integration

  Language:Jupyter Notebook11201

• JKoblitz/MetaboMAPS

  Data visualization on metabolic pathway maps.

  Language:JavaScript8102

• bioinformatics-core-shared-training/Quantitative-ChIPseq-Workshop

  EuroBioc 2020 Workshop: ChIP and ATAC analysis with DiffBind

  Language:R7905

• lyons89/awesome-proteomics

  An awesome list of proteomics tools and resources

  4100

• marislab/epigenomics-data-descriptor

  Language:Shell4500

• cran/iDINGO

  :exclamation: This is a read-only mirror of the CRAN R package repository. iDINGO — Integrative Differential Network Analysis in Genomics

  Language:R3301

• harmancilab/EpiSAFARI

  EpiSAFARI: Sensitive Detection of Valley Shaped Patterns in Epigenetic Signal Profiles

  Language:C++2232

• Pooran-Dewari/create-blacklist-fie-for-ChIP-seq-analysis

  Installation and running umap and blacklist packages for ChIP-seq

  Language:Shell2201

• snorlaxchoi/beginner-python-data-science-crashcourse

  It is a complied jupyter notebook with all the essentials for python beginner and data science beginner.

  Language:Jupyter Notebook20

• DianaElena99/DataScience-Crashcourse

  Practicing some core data science concepts in Jupyter notebooks

  Language:Jupyter Notebook1

• Dkpingi/SemanticSegmentationWithUnet

  Performing semantic segmentation on darkfield microscopy images using a u-net.

  Language:Python110

• marwagaser/JupyterNotebook_Python_CrashCourse

  This respository has an introductory explanation of jupyter notebook, Python 3.X, Numpy, and Pandas.

  Language:Jupyter Notebook1200