Pinned Repositories
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
Bioinformatic-Tools
Selection of random bioinformatic scripts I have made over the years.
FrameRate
just-the-docs_template
ORForise
Comparison pipeline for Prokaryote Protein Coding Gene Predictors
Project_6
PyamilySeq
PyamilySeq is a Python-based tool for clustering gene sequences into groups (families) based on sequence similarity identified by tools such as CD-HIT, DIAMOND or MMseqs2.
rORForise
Read-based gene coverage evaluation
StORF-Reporter
Package to extract Unannotated Regions from prokaryotic genomes report coding and pseudogenised genes delimited by stop codons - Named StORFs (Stop - Open Reading Frames)
Roary
Rapid large-scale prokaryote pan genome analysis
NickJD's Repositories
NickJD/ORForise
Comparison pipeline for Prokaryote Protein Coding Gene Predictors
NickJD/StORF-Reporter
Package to extract Unannotated Regions from prokaryotic genomes report coding and pseudogenised genes delimited by stop codons - Named StORFs (Stop - Open Reading Frames)
NickJD/FrameRate
NickJD/PyamilySeq
PyamilySeq is a Python-based tool for clustering gene sequences into groups (families) based on sequence similarity identified by tools such as CD-HIT, DIAMOND or MMseqs2.
NickJD/Bioinformatic-Tools
Selection of random bioinformatic scripts I have made over the years.
NickJD/just-the-docs_template
NickJD/Project_6
NickJD/rORForise
Read-based gene coverage evaluation