MultiQC/MultiQC

Issues

• Unit testing for core library

  #2531 opened a month ago by ewels
  1

• v1.22 does not work inside nextflow work directory

  #2569 opened 15 days ago by ewels
  4

• Failed with cellranger multi

  #2578 opened 16 days ago by khoidnyds
  1

• Deprecate / remove config option `prokka_fn_snames`

  #2571 opened 16 days ago by ewels
  0

• Failure to write report when a table has an empty column that contains a modify lambda

  #2562 opened 18 days ago by mjhipp
  0

• Fix PyPI readme logo

  #2567 opened 18 days ago by ewels
  0

• Show progress status of running modules

  #2565 opened 18 days ago by vladsavelyev
  0

• samtools coverage log file skipped by the search

  #2561 opened 18 days ago by charlenelawdes
  0

• Report: Add back "Y-Limits" toggle button

  #2559 opened 19 days ago by ewels
  0

• Profile resident memory per module

  #2549 opened 24 days ago by vladsavelyev
  0

• MultiQC ignoring first line of TSV file

  #2550 opened 23 days ago by MTDouglas
  2

• Custom content works for interactive report but breaks for flat report

  #2555 opened 20 days ago by barslmn
  0

• Cannot run multiqc

  #2514 opened 24 days ago by sjclare
  4

• Reduce MultiQC memory consumption

  #2517 opened a month ago by rhpvorderman
  5

• Add config JSON schema to schema store

  #2541 opened a month ago by ewels
  0

• hostile not actually supported in v1.21 ("Invalid value for '-m' / '--module': 'hostile' is not one of . . .")

  #2539 opened a month ago by bdklahn
  2

• Goleft/indexcov module breaks: no datasets to plot

  #2537 opened a month ago by tstoeriko
  2

• Fastp module fails when input reads were provided from stdin

  #2527 opened a month ago by IdoBar
  3

• Could not figure out read 2 length from RunInfo.xml

  #2508 opened a month ago by nick-youngblut
  5

• Jupyter Notebooks: Iterative running with custom content

  #2452 opened a month ago by ewels
  0

• Use `pydantic-settings` to read config from different sources

  #2535 opened a month ago by vladsavelyev
  0

• Interactive usage: additive `multiqc.parse_logs()` sample parsing

  #2533 opened a month ago by vladsavelyev
  0

• Add API (function) docs

  #2530 opened a month ago by ewels
  0

• AttributeError: module 'numpy' has no attribute 'int'.

  #2522 opened a month ago by ngctkk
  2

• KeyError: 'antibody_treemap_plot' in cellranger outout web_summary.html from a CITEseq experiment

  #2520 opened a month ago by yige-luo
  1

• Some updates needed for the picard module

  #2521 opened a month ago by yfarjoun
  0

• Validate incorrect format strings in table headers

  #2524 opened a month ago by vladsavelyev
  0

• Cutadapt module broke

  #2519 opened a month ago by xguo-nveloptx
  1

• Faster JSON dumping.

  #2518 opened a month ago by rhpvorderman
  1

• use JSON format for config file

  #2471 opened a month ago by stevekm
  2

• Add ngs-bits SampleGender output to MultiQC

  #2507 opened a month ago by peterpru
  0

• qc3c unable to recognize the sample name

  #2500 opened a month ago by Rohit-Satyam
  1

• Kraken report gives an error

  #2497 opened a month ago by lskatz
  4

• mosdepth module: allow representing in full coverages < 1X in the General Stats table

  #2468 opened a month ago by lbeltrame
  6

• Add "ge" and "le" comparisons to conditional formatting rules

  #2481 opened a month ago by briankegerreis
  1

• error with bamdst multiqc module - multiqc 1.21

  #2474 opened 2 months ago by tamuanand
  16

• NovaSeqXPlus issue for MultiQC_SAV

  #2493 opened 2 months ago by Nitin123-4
  2

• Add glimpse to multiqc

  #2491 opened 2 months ago by LouisLeNezet
  0

• Exporting plots not working

  #2470 opened 2 months ago by jedpe-ucla
  2

• ignore pass/fail/warning from FastQC module

  #2483 opened 2 months ago by a-frantz
  2

• Version 1.21 not working with bbmap test data

  #2480 opened 2 months ago by erinyoung
  1

• Could you please add DRAGEN gvcf metrics to the general stats?

  #2482 opened 2 months ago by fsharifi
  2

• Custom data into general stats table

  #2476 opened 2 months ago by solcos
  0

• [feature] Create arbitrary plot legends

  #2475 opened 2 months ago by ewels
  0

• make `module_order` take into account `parent_id` from scanned custom data.

  #2469 opened 2 months ago by jdcla
  0

• Custom data grouping into different subtabs

  #2467 opened 2 months ago by jdcla
  0

• Time X axis

  #2464 opened 2 months ago by rolivella
  1

• ZeroDivisionError

  #2461 opened 2 months ago by nick-youngblut
  1

• A method for a generic table

  #2459 opened 2 months ago by lskatz
  3

• SampleIDs order

  #2458 opened 2 months ago by JHBI115
  0