NoahHenrikKleinschmidt
PhD student in Bioinformatics at the Institute of Biochemistry and Molecular Medicine at the University of Bern
University of Bern (@ibmm-unibe-ch)Switzerland
Pinned Repositories
buildamol
A fragment-based molecular assembly toolkit
Computational_Epidemiology_SIR_model
eco_helper
A command line data handling and preprocessing toolbox
eco_helper_viewer
A streamlit web-viewer for gene set enrichments of EcoTyper results generated by eco_helper
filerecords
A command line tool to keep track of file metadata through comments and flags.
NoahHenrikKleinschmidt
Config files for my GitHub profile.
Qlipper
A small web-app to generate Ct values from qPCR absorption curves
qpcr
A python package to analyse qPCR data for single-use or high-throughput application
Qupid
Qupid (Quantitative PCR Interface to Delta-Delta-Ct) - a versatile web-application for swift Delta-Delta-Ct analysis of qPCR data
scRNASeq2022
This project analyses scRNA-Seq data from hepatocellular carcinoma using the EcoTyper software by Steen/Luca et al. (2021). This repository contains scripts used for data analysis and environment setup.
NoahHenrikKleinschmidt's Repositories
NoahHenrikKleinschmidt/qpcr
A python package to analyse qPCR data for single-use or high-throughput application
NoahHenrikKleinschmidt/Qupid
Qupid (Quantitative PCR Interface to Delta-Delta-Ct) - a versatile web-application for swift Delta-Delta-Ct analysis of qPCR data
NoahHenrikKleinschmidt/buildamol
A fragment-based molecular assembly toolkit
NoahHenrikKleinschmidt/Computational_Epidemiology_SIR_model
NoahHenrikKleinschmidt/Qlipper
A small web-app to generate Ct values from qPCR absorption curves
NoahHenrikKleinschmidt/scRNASeq2022
This project analyses scRNA-Seq data from hepatocellular carcinoma using the EcoTyper software by Steen/Luca et al. (2021). This repository contains scripts used for data analysis and environment setup.
NoahHenrikKleinschmidt/eco_helper
A command line data handling and preprocessing toolbox
NoahHenrikKleinschmidt/eco_helper_viewer
A streamlit web-viewer for gene set enrichments of EcoTyper results generated by eco_helper
NoahHenrikKleinschmidt/filerecords
A command line tool to keep track of file metadata through comments and flags.
NoahHenrikKleinschmidt/NoahHenrikKleinschmidt
Config files for my GitHub profile.
NoahHenrikKleinschmidt/pyTermWindows
A package to make responsive terminal windows in python
NoahHenrikKleinschmidt/slurmtools
A wrapper for the SLURM job handler on high-performance computer clusters