OHDSI/dbt-synthea
[Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM
PythonApache-2.0
Issues
- 0
Investigate dbt test failure
#50 opened by katy-sadowski - 1
Run DQD on the dbt-synthea OMOP CDM
#44 opened by katy-sadowski - 0
Populate CDM_SOURCE with user input
#48 opened by katy-sadowski - 0
Visit model not deterministic?
#47 opened by katy-sadowski - 0
Add back ignored SQLFluff checks
#46 opened by katy-sadowski - 1
Add CARE_SITE model(s)
#41 opened by katy-sadowski - 1
Add LOCATION model(s)
#42 opened by katy-sadowski - 0
Complete OMOP table config
#37 opened by katy-sadowski - 0
Look into potential visit ID assignment bug
#43 opened by katy-sadowski - 0
Move date typecasts into stg models
#40 opened by katy-sadowski - 1
- 0
Add back requirements.txt
#33 opened by katy-sadowski - 0
Add tests for vocabulary stg models
#35 opened by katy-sadowski - 0
- 0
Add cross-database macros where needed to ensure SQL queries work on all OHDSI-supported database platforms
#39 opened by katy-sadowski - 0
Add a "dev mode" variable to toggle on materialization of stg and int models
#38 opened by katy-sadowski - 0
Fix SqlFluff<>duckdb issue
#34 opened by katy-sadowski - 0
Create stg model for supplies
#27 opened by katy-sadowski - 0
Create stg model for procedures
#25 opened by katy-sadowski - 0
Create stg model for providers
#26 opened by katy-sadowski - 0
Create stg model for observations
#20 opened by katy-sadowski - 0
Create stg model for organizations
#21 opened by katy-sadowski - 0
Create stg model for payer_transitions
#23 opened by katy-sadowski - 0
Create stg model for payers
#24 opened by katy-sadowski - 0
Create stg model for encounters
#16 opened by katy-sadowski - 0
Create stg model for imaging_studies
#17 opened by katy-sadowski - 0
Create stg model for immunizations
#18 opened by katy-sadowski - 0
Create stg model for medications
#19 opened by katy-sadowski - 0
Create stg model for claims_transactions
#12 opened by katy-sadowski - 0
Create stg model for claims
#13 opened by katy-sadowski - 0
Create stg model for conditions
#14 opened by katy-sadowski - 0
Create stg model for devices
#15 opened by katy-sadowski - 4
Implement and configure SQLFluff in the repo
#7 opened by vvcb - 0
Add a style guide markdown document to the repo
#8 opened by vvcb - 0
Create stg model for careplans
#11 opened by katy-sadowski - 0
Create stg model for allergies
#10 opened by katy-sadowski - 0
Overall dbt-synthea layout
#29 opened by RogerJCarlson - 1
Create stg model for patients
#22 opened by katy-sadowski - 2
Contribution
#1 opened by rjimenezhsc