/Chimeric-Alignment-problem

A python script that implements an efficient algorithm for the Chimeric Alignment problem. A virus infects a bacterium and modifies a replication process in the bacterium by adding for each A an A sequence of length 1-5, for each C a C sequence of length 1-10, for each G a G sequence of length >= 1 and for each T a T sequence of length >= 1.

Primary LanguagePythonMIT LicenseMIT

A Python Program / Project

This is a Python project from my early days as a Computer Science student

This programm was created for the sixth semester class Bioinformatics and is one of the final projects for the class

Description of project

A python script that implements an efficient algorithm for the Chimeric Alignment problem. A virus infects a bacterium and modifies a replication process in the bacterium by adding for each A an A sequence of length 1-5, for each C a C sequence of length 1-10, for each G a G sequence of length >= 1 and for each T a T sequence of length >= 1.

About this project

  • The comments to make the code understandable, are within the .py archive
  • This project was written in IDLE, Python’s Integrated Development and Learning Environment.
  • This program runs for Python version 2.7
  • This repository was created to show the variety of the work I did and experience I gained as a student