Issues
- 1
Improve how new IDs are submitted to LitScan
#194 opened by carlosribas - 0
Delete rnc_coordinates
#134 opened by blakesweeney - 0
Check status of pybedtools in pip
#174 opened by afg1 - 0
Import rediportal data
#173 opened by blakesweeney - 0
Produce species level fasta files
#172 opened by blakesweeney - 0
Validate expression atlas mappings
#171 opened by blakesweeney - 0
Import REDIportal data
#169 opened by blakesweeney - 1
Improve handing of expression data
#137 opened by afg1 - 3
Delete all entries in rnc_secondary_structure
#148 opened by blakesweeney - 1
- 3
- 0
Ensure precompute uses all expected xrefs
#165 opened by blakesweeney - 1
Fix poetry
#156 opened by afg1 - 0
Decide what to do about circRNA and sgRNA
#157 opened by afg1 - 0
Import sequences from IntAct
#154 opened by blakesweeney - 3
Delete all entries in pipeline_tracking_travler
#147 opened by blakesweeney - 0
Validate changes to 2D diagrams
#150 opened by blakesweeney - 0
Rescan all sequences
#149 opened by blakesweeney - 0
Run the weekly update database import with tower
#144 opened by blakesweeney - 0
Configure a medium sized analysis run
#143 opened by blakesweeney - 0
Configure nextflow/patch pipeline to only run 1000 sequences against r2dt
#142 opened by blakesweeney - 0
Check if reporting is useful
#140 opened by blakesweeney - 0
- 0
Auto remove obsoleted GO terms
#138 opened by afg1 - 2
Fix spelling mistake in some sequences
#119 opened by blakesweeney - 1
- 1
Fix taxonomy & number of species
#124 opened by afg1 - 0
Track database update schedule in rnc_database
#135 opened by blakesweeney - 0
Improve batch lookup of GO terms
#133 opened by blakesweeney - 0
Fix duplicated links for some databases
#131 opened by blakesweeney - 3
Upper case all sequences when importing
#130 opened by blakesweeney - 0
Import GTEx data
#129 opened by blakesweeney - 0
Fetch mouse phenotype data
#128 opened by blakesweeney - 1
Update LncBook data
#115 opened by blakesweeney - 0
Import NPInter data
#127 opened by blakesweeney - 2
Consider importing CLC2 lncRNA data
#122 opened by blakesweeney - 1
Import lncRNA Atlas
#123 opened by blakesweeney - 0
Import newer MODOMICS data
#121 opened by blakesweeney - 1
Fix off by one error in miRNA data
#118 opened by blakesweeney - 0
Fix bed coordinate issues
#117 opened by blakesweeney - 0
Import EVLncRNAs database
#116 opened by blakesweeney - 0
Update mirgenedb data
#109 opened by blakesweeney - 0
Export high quality set of GO annotations
#108 opened by blakesweeney - 0
Export high quality set of Rfam annotations
#107 opened by blakesweeney - 0
Ensure we handle removing GO terms from quickgo
#106 opened by blakesweeney - 0
Explore linking to complex portal
#105 opened by blakesweeney - 0
Get UniProt descriptions
#104 opened by carlosribas - 2
tRNAs from LncBook
#101 opened by mumichae - 1
- 1
Gene type 'ncRNA'
#103 opened by mumichae