About the perturbation
SZ-qing opened this issue · 2 comments
SZ-qing commented
Hello, I saw in your article that samples that have received drug treatment will be eliminated when perturbing. What I want to ask is if I use the move tool to disturb, do I need to take the sample that received a certain drug by myself? Remove it, or the current code will automatically remove it for me.
Thanks.
ri-heme commented
Hi there. Those samples will be removed automatically. So if your dataset has 400 samples (205 control, 195 under treatment) and you make the perturbation "control ➡️ treatment," then the 195 treatment samples will be "removed" during the associations step.
SZ-qing commented
Thanks
…---- Replied Message ----
| From | Ricardo Hernández ***@***.***> |
| Date | 07/14/2023 19:16 |
| To | RasmussenLab/MOVE ***@***.***> |
| Cc | SZ-qing ***@***.***>,
Author ***@***.***> |
| Subject | Re: [RasmussenLab/MOVE] About the perturbation (Issue #86) |
Hi there. Those samples will be removed automatically. So if your dataset has 400 samples (205 control, 195 under treatment) and you make the perturbation "control ➡️ treatment," then the 195 treatment samples will be "removed" during the associations step.
—
Reply to this email directly, view it on GitHub, or unsubscribe.
You are receiving this because you authored the thread.Message ID: ***@***.***>