RasmussenLab/MOVE
MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
Jupyter NotebookMIT
Issues
- 0
numpy 2.0 update
#97 opened by enryH - 1
- 1
- 1
Set-up CI workflow
#7 opened by ri-heme - 0
The calculation of effect size
#87 opened by Haonan917 - 2
About the perturbation
#86 opened by SZ-qing - 5
- 0
NNFC Workshop
#78 opened by ri-heme - 1
- 3
Error during __tune_reconstruction: score in calculate_accuracy (metrics.py) cannot be calculated
#74 opened by thorhennig - 2
`requirments.txt`
#13 opened by enryH - 2
🎨 Format docstrings
#31 opened by ri-heme - 0
GPU Training
#59 opened by ri-heme - 0
Adhere to PEP8 style guide
#6 opened by ri-heme - 0
Use Hydra multirun mode to do optimization tasks
#38 opened by ri-heme - 2
QoL changes
#53 opened by ri-heme - 0
Update tutorial text
#60 opened by ri-heme - 0
👩🏽🏫 Update tutorial
#48 opened by ri-heme - 1
02_optimize_reconstruction write out results
#30 opened by simonrasmu - 0
Clean-up config files
#41 opened by ri-heme - 0
Remove number of samples from categorical shapes
#39 opened by ri-heme - 2
Expected MOVE tutorial runtime?
#43 opened by fotiniak - 1
plot_reconstruction
#27 opened by simonrasmu - 0
Simplify plotting functions
#20 opened by simonrasmu - 1
Make each module output to its own folder
#25 opened by simonrasmu - 0
Perturbations with continuous data
#33 opened by simonrasmu - 0
Re-structure module 4 (analyze latent)
#40 opened by ri-heme - 0
Best latent representation
#22 opened by simonrasmu - 0
Organize code
#5 opened by ri-heme - 0
Setting groups
#36 opened by simonrasmu - 0
- 1
Add more user info on step 05
#23 opened by simonrasmu - 0
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- 2
- 8
defining entrypoints
#14 opened by enryH - 2
- 6
tuning_stability.yaml
#19 opened by simonrasmu - 1
Use of log-file
#15 opened by simonrasmu - 4
- 2
Rename 05_identify_drug_assosiation
#17 opened by simonrasmu - 1
stability plots x-labels can't be seen
#21 opened by simonrasmu - 3
Reduce memory of step 05
#16 opened by simonrasmu - 0
Set up configuration system
#8 opened by ri-heme