RobertoDF

Spanning time

Humboldt-Universität zu BerlinBerlin

Pinned Repositories

AllenSDK
code for reading and processing Allen Institute for Brain Science data
Language:Jupyter Notebook335 34 1.6k149
brainrender
a python based software for visualization of neuroanatomical and morphological data.
Language:Python533 17 21975
abfload
matlab fuction for reading abf files including v2.0 files
Language:MATLAB0 1 00
AllenSDK
code for reading and processing Allen Institute for Brain Science data
Language:Jupyter Notebook10
BRIO
BRain area Input Output
Language:MATLAB5 2 00
De-Filippo-et-al-2022
Code for the reproduction of De Filippo et al., 2022.
Language:Jupyter Notebook00
End2EndPaper
Language:Python30
Kilosort
Fast spike sorting with drift correction for up to a thousand channels
Language:MATLAB3 1 01
Transcriptomics-5-HT
Language:Jupyter Notebook00
vizs
00

RobertoDF's Repositories

RobertoDF/BRIO
BRain area Input Output
Language:MATLAB5 2 00
RobertoDF/End2EndPaper
Language:Python30
RobertoDF/Kilosort
Fast spike sorting with drift correction for up to a thousand channels
Language:MATLAB3 1 01
RobertoDF/AllenSDK
code for reading and processing Allen Institute for Brain Science data
Language:Jupyter Notebook10
RobertoDF/Allen_visual_dataset_artifacts
tables with dataset artifacts
Language:Jupyter Notebook00
RobertoDF/allenCCF
Tools to work with Allen Inst CCF data in matlab
Language:MATLAB0 1 00
RobertoDF/brainrender
a python based software for visualization of neuroanatomical and morphological data.
Language:Python0 1 00
RobertoDF/De-Filippo-et-al-2022
Code for the reproduction of De Filippo et al., 2022.
Language:Jupyter Notebook00
RobertoDF/DeepCCA
An implementation of Deep Canonical Correlation Analysis (DCCA or Deep CCA) with pytorch.
Language:Python0 0 00
RobertoDF/Transcriptomics-5-HT
Language:Jupyter Notebook00
RobertoDF/vizs
00
RobertoDF/brainglobe-heatmap
Rendering anatomical heatmaps with brainrender and matplotlib
Language:Python
RobertoDF/ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
Language:Python1 01
RobertoDF/licking_behavior_NP
Analysis of mouse licking behavior during visually guided behavior
Language:Python
RobertoDF/matlab-plot-big
Makes large MATLAB line plots much faster.
Language:MATLAB1 0
RobertoDF/notBoxPlot
plots things that are not boxplots
Language:MATLAB1 0
RobertoDF/openscope_psycode
This repository contains the stimulus behind the PsyCode project
Language:Python
RobertoDF/pd-mkmr
A compilation of vanilla made abstractions
1 0
RobertoDF/RainCloudPlots
Code and tutorials to visualise your data that is both beautiful *and* statistically valid
Language:HTML1 0
RobertoDF/RobertoDF.github.io
Language:Ruby2 0
RobertoDF/Robust_Statistical_Toolbox
Robust_Statistical_Toolbox
Language:MATLAB1 0
RobertoDF/shadedErrorBar
Produce elegant shaded error bars in MATLAB
Language:MATLAB1 0
RobertoDF/sigstar
add significance stars to MATLAB plots
Language:MATLAB1 0
RobertoDF/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
Language:Python
RobertoDF/spikes
cortex lab code for electrophysiology
Language:MATLAB1 0
RobertoDF/spikesorting
Language:Jupyter Notebook
RobertoDF/stringer-pachitariu-et-al-2018a
Recordings of 10k neurons during spontaneous behaviors
Language:MATLAB0 0
RobertoDF/stringer-pachitariu-et-al-2018b
Responses of 10,000 neurons to 2,800 natural images
Language:MATLAB0 0
RobertoDF/test_deploy_website
Language:HTML
RobertoDF/TSPE
Total Spiking Probability Edges is a Cross-Correlation based method for eﬀective connectivity estimation of cortical spiking neurons.
Language:MATLAB1 0