Centralise the binary file saving metadata
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JoeZiminski commented
Following on from a discussion at #3245. At present there is a binary.json metadata file written during the saving of binary data. This duplicates the si_folder.json metadata which has caused some problems with failure to propagate metadata and confusing behaviour during debugging #3245. The logic flow for the data-saving is discussed here. It would be nice to completely deprecate binary.json and use only si_folder.json to centralise the metadata.