Sydney-Informatics-Hub/Fastq-to-BAM

align_make_input.sh lib_diff is Initialised Empty and Never Set Otherwise

DarioS opened this issue · 1 comments

On line 51, lib_diff='' is declared, it is never set to anything else and is checked on line 64 if [ "$lib_diff" ].

Thanks Dario. This was a relic from OSCC cohort which had 2 libraries per sample, the script and config was customised to address this. The $lib_diff variable has now been removed.