TerminatorJ
I am a PhD student at the University of Copenhagen, interested in NLP/machine learning/deep learning, and their application in the biomedical fields
Pinned Repositories
BERTLocRNA
Using Large language model to predict localization
CRISPR-TRAP-seq
This is a ML learning model to predict the gRNA efficiency of trap-based editing system. eg.ABE, CBE, Cas9
DeepLocRNA
This is the counterpart of DeepLoc, but in RNA level
DeepRNAgenerator
This is used to generate optimized RNA for vaccine design
delfi_scripts
Find_cell_marker
This is a software for identifying the cell type for single cell analysing
GNL_Scorer
this is a software for sgRNA activity prediction with great generalization
Rankcomp
This is a learning framework to extract the DEG (Differential expression genes) by high fided gene pairs
Rankcomp2
A learning framework to get DEG(Differential expression genes)
RNA-localization
This repository can be used to data sharing, code sharing, and feedbacks
TerminatorJ's Repositories
TerminatorJ/Azimuth
Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency
TerminatorJ/hellow-