Pinned Repositories
abcpy
ABCpy package
biodocker
docker images for bioinformatics
clustermq
R package to send function calls as jobs on LSF, SGE, Slurm, PBS/Torque, or each via SSH
diversity-determinants-recombination-landscapes-flowering-plants
Diversity an determinants of recombination landscapes in flowering plants
EasyMareyMap
Another Marey Map package
evolsv
ldhat-snakemake-pipeline
PiSlice
Estimate Pi and other population genomics statistics for a given list of windows coordinates
snpArcher-dev
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
thomasbrazier.github.io
Recombination Landscapes and Genome Evolution in Angiosperms
ThomasBrazier's Repositories
ThomasBrazier/diversity-determinants-recombination-landscapes-flowering-plants
Diversity an determinants of recombination landscapes in flowering plants
ThomasBrazier/evolsv
ThomasBrazier/ldhat-snakemake-pipeline
ThomasBrazier/thomasbrazier.github.io
Recombination Landscapes and Genome Evolution in Angiosperms
ThomasBrazier/abcpy
ABCpy package
ThomasBrazier/biodocker
docker images for bioinformatics
ThomasBrazier/EasyMareyMap
Another Marey Map package
ThomasBrazier/PiSlice
Estimate Pi and other population genomics statistics for a given list of windows coordinates
ThomasBrazier/snpArcher-dev
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
ThomasBrazier/coursera-deep-learning
Practicals and tutorials of the Deep Learning specialization in Coursera
ThomasBrazier/dna-seq-gatk-variant-calling
This Snakemake pipeline implements the GATK best-practices workflow
ThomasBrazier/docker-aevol
Aevol in a Docker
ThomasBrazier/docker-biohazard
A simple docker for the Biohazard bioinformatic tool
ThomasBrazier/docker-faststructure
FastStructure
ThomasBrazier/docker-LDhat
ThomasBrazier/docker-libbam
Bam Tools
ThomasBrazier/docker-pyrho
ThomasBrazier/evince-academic
Fork of evince - New features and ergonomy for my own Academic use
ThomasBrazier/genomics-data-skills
Resources and documentation for population genomics and advanced data science skills
ThomasBrazier/hugo-deploy-gh-pages
📦 A GitHub Action to build and deploy a Hugo site to GitHub Pages
ThomasBrazier/landrec-gradients
Public code for the MBE paper " Diversity in Recombination Hotspot Characteristics and Gene Structure Shape Fine-Scale Recombination Patterns in Plant Genomes"
ThomasBrazier/landrec-lifehistory-ms
ThomasBrazier/LD_deleterious_mutations
ThomasBrazier/LDhot-docker
Detect recombination hotspots using population genetic data.
ThomasBrazier/ngsParalog
Copy number variation detection using NGS data.
ThomasBrazier/nvim-config
A modern Neovim configuration with full battery for Python, Lua, C++, Markdown, LaTeX, and more...
ThomasBrazier/ReLERNN
Recombination Landscape Estimation using Recurrent Neural Networks
ThomasBrazier/snp-calling-gatk
ThomasBrazier/starter-hugo-academic
ThomasBrazier/tbrazier-website
My academic resumé