TimoLassmann

TimoLassmann's Stars

• FlowiseAI/Flowise

  Drag & drop UI to build your customized LLM flow

  Language:TypeScript30.4k2481.4k15.7k

• karpathy/llm.c

  LLM training in simple, raw C/CUDA

  Language:Cuda23.7k2331382.7k

• asg017/sqlite-vec

  A vector search SQLite extension that runs anywhere!

  Language:C3.9k5590132

• webyrd/Barliman

  Prototype smart text editor

  Language:Scheme1k50830

• oantolin/embark

  Emacs Mini-Buffer Actions Rooted in Keymaps

  Language:Emacs Lisp9181551056

• r-lib/pak

  A fresh approach to package installation

  Language:C6721156261

• torognes/vsearch

  Versatile open-source tool for microbiome analysis

  Language:C++65644539122

• google-deepmind/alphamissense

  Language:Python50025065

• Teichlab/scg_lib_structs

  Collections of library structure and sequence of popular single cell genomic methods

  Language:HTML420311387

• julia4ta/tutorials

  This is the official repository for the "doggo dot jl" YouTube channel (fka "julia for talented amateurs").

  Language:HTML26912357

• scverse/muon

  muon is a multimodal omics Python framework

  Language:Python2111410730

• rcedgar/muscle

  Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.

  Language:C++19267222

• protesilaos/dotfiles

  Configuration files for Emacs and some other programs. Running on Arch Linux. Managed with GNU Stow.

  Language:Emacs Lisp1758416

• rvaser/spoa

  SIMD partial order alignment tool/library

  Language:C++158165132

• Clinical-Genomics/scout

  VCF visualization interface

  Language:HTML150152.6k46

• yfukasawa/LongQC

  LongQC is a tool for the data quality control of the PacBio and ONT long reads.

  Language:C14317616

• thegenemyers/FASTGA

  Pairwise whole genome aligner

  Language:C1351035

• percolator/percolator

  Semi-supervised learning for peptide identification from shotgun proteomics datasets

  Language:C++1272430536

• jmbreda/Sanity

  Filtering of Poison noise on a single-cell RNA-seq UMI count matrix

  Language:MATLAB6742211

• Jiefei-Wang/Painless-R-compilation-and-installation-on-Ubuntu

  recipe for all dependencies of R on Ubuntu

  35118

• lh3/lv89

  C implementation of the Landau-Vishkin algorithm

  Language:C++35340

• attractivechaos/khashl

  Generic hash table library in C

  Language:C21260

• tseemann/scripts

  Miscellaneous Perl scripts from 20 years in microbial bioinformatics

  Language:Perl1610

• thegenemyers/HI.SIM

  HiFi error modeler and simulator with ploidy

  Language:C11311

• AlphonsG/EPIC-BBox-Cell-Tracking

  Harness deep learning and bounding boxes to perform object detection, segmentation, tracking and more.

  Language:Python8332

• TimoLassmann/tldevel

  C library used by Timo Lassmann's code

  Language:C3201

• JuliaBinaryWrappers/kalign_jll.jl

  Language:Julia140

• PRISM-SING-HEALTH/2023-NCP-Projects

  Language:Python10

• socaugusto/Modern-C

  Modern C code snippets

  Language:C10

• wlchin/DREAM_computational_worfklow

  Code repository for DREAM computational workflow

  Language:HTML1