Pinned Repositories
SigProfilerAssignment
Assignment of known mutational signatures to individual samples and individual somatic mutations
AmpliconSuite-pipeline
A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior to running AmpliconArchitect. Previously called PrepareAA.
hmftools
Various algorithms for analysing genomics data
Config-files-for-Vim
Plugins for vim
EVCpipeline
Ensemble Variant Calling is an analysis pipeline that calls somatic variants in a consensus manner from WGS /WES seqencing
How-to-RNAseq
RNA-seq alignment and DESeq2 Analysis
IntOGen
IntOGen under AWS notes
MachineLearning_coursera
Machine Learning Coursera Lessons from Stanford University
RNA-seq_variant-calling
RNA-seq germline variant calling workflow
TCRsequencing
Bulk TCR sequencing and analysis with MiXCR and Immunarch
Tina04021997's Repositories
Tina04021997/RNA-seq_variant-calling
RNA-seq germline variant calling workflow
Tina04021997/TCRsequencing
Bulk TCR sequencing and analysis with MiXCR and Immunarch
Tina04021997/Config-files-for-Vim
Plugins for vim
Tina04021997/EVCpipeline
Ensemble Variant Calling is an analysis pipeline that calls somatic variants in a consensus manner from WGS /WES seqencing
Tina04021997/How-to-RNAseq
RNA-seq alignment and DESeq2 Analysis
Tina04021997/IntOGen
IntOGen under AWS notes
Tina04021997/MachineLearning_coursera
Machine Learning Coursera Lessons from Stanford University