Pinned Repositories
AresDown4
Noise activated video capture (sort of)
bbmapy
biofiles
R interface to GenBank/GenPept files
ictv-mmseqs2-protein-database
Antonio is too busy
LSV
Scripts and code used in the analyses of Haloferax volcanii 48N lemon-shaped virus
RNAfold_virus_Rima
Rima's lab project
RVMT
Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.
urineri.github.io
vdsearch
Viroid-like circRNA discovery and analysis suite
UriNeri's Repositories
UriNeri/RVMT
Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.
UriNeri/RNAfold_virus
Rima's lab project
UriNeri/LSV
Scripts and code used in the analyses of Haloferax volcanii 48N lemon-shaped virus
UriNeri/urineri.github.io
UriNeri/vdsearch
Viroid-like circRNA discovery and analysis suite
UriNeri/AresDown4
Noise activated video capture (sort of)
UriNeri/biofiles
R interface to GenBank/GenPept files
UriNeri/clinker
Gene cluster comparison figure generator
UriNeri/ColabScan
Making it easier for non-bioinfos to search their data for RdRps
UriNeri/ENC_Virus
UriNeri/fasten
:construction_worker: Fasten toolkit, for streaming operations on fastq files
UriNeri/Gen2Mat
UriNeri/genomad
geNomad: Identification of mobile genetic elements
UriNeri/hh-suite
Remote protein homology detection suite.
UriNeri/hpc_hmmsearch
Top level driver addition to a HMMER3.1b2 installation which more efficiently runs many sequence to many model searches on many cores with threading.
UriNeri/misc
UriNeri/NeriMisc
Neri's Miscellaneous R helper functions
UriNeri/pure-bash-bible
📖 A collection of pure bash alternatives to external processes.
UriNeri/pyrodigal-gveter
A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.
UriNeri/riboviria.org
Source code for riboviria.org
UriNeri/SRAInfo
Easy-to-use python script that takes a list/table with SRA accessions and returns a table with metadata
UriNeri/viridis-theme
💚 tmTheme and rstheme based on the `viridis` color palette