V-JJ

PhD Student - "Evolutionary Genomics & Bioinformatics" Research group @molevol-ub

Pinned Repositories

quarTeT
A telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification
Language:Python113 4 449
ntJoin
🔗Genome assembly scaffolder using minimizer graphs
Language:Python83 5 5115
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
Language:Perl373 23 83083
galeon
Language:HTML8 1 10
Broccoli
orthology assignment using phylogenetic and network analyses
Language:Python47 1 200
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes
Language:Perl0 0 00
code_snippets
Language:Jupyter Notebook0 0 00
dgenies
Dotplot large Genomes in an Interactive, Efficient and Simple way
Language:Python0 0 00
miniasm
Ultrafast de novo assembly for long noisy reads (though having no consensus step)
Language:TeX0 0 00
TE_annotation
Transposable element annotation of Drosophila genomes
Language:HTML0 0 00

V-JJ/BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes
Language:Perl0 0 00
V-JJ/code_snippets
Language:Jupyter Notebook0 0 00
V-JJ/dgenies
Dotplot large Genomes in an Interactive, Efficient and Simple way
Language:Python0 0 00
V-JJ/miniasm
Ultrafast de novo assembly for long noisy reads (though having no consensus step)
Language:TeX0 0 00
V-JJ/TE_annotation
Transposable element annotation of Drosophila genomes
Language:HTML0 0 00