Cannot find CCFv3 dataset
Opened this issue · 1 comments
Dear Professor,
I want to know where I can find this file when I try this great STitch3D.
#3D coordinates and model are based on CCFv3.
load("spotstable.RData")
load("VOLUMESMALL.RData")
load("VOLUME.RData")
in this part, "Run STitch3D on the adult mouse brain dataset"
I know this issue has been discussed in #14, but I am experiencing the same problem and am unsure how to modify the paths path.bin and path.matrices to the corresponding folders to obtain the data I need.
Thank you so much!
Hi there,
path.bin refers to the path to the folder on your computer containing scripts in https://github.com/cantin-ortiz/molecular-atlas/tree/a409706716520a29471882c535b618a28d6a2b0c/bin. 'path.matrices' refers to the folder containing atlasspots.RData and vivid-colors.RData, which can be found in https://github.com/cantin-ortiz/molecular-atlas.