YangLabHKUST/STitch3D

How can I find the file "slicestable.tsv"?

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Dear Professor,
I want to know where I can find this file "slicestable.tsv" when I try this great STitch3D.
meta_slice = pd.read_csv("./data/molecular-atlas-master/data/slicestable.tsv",
index_col=0, sep="\t")
in this part "Run STitch3D on the adult mouse brain dataset".
Thanks in advance!

Hi Cristal,

"slicestable.tsv" is publicly available at the repository https://github.com/cantin-ortiz/molecular-atlas. You need to download the data files through https://www.molecularatlas.org/data-to-download/intermediary_data/figures.zip and rename the unzipped folder as "data".

Thanks a lot!