ZJUFanLab/bulk2space

Issues

• Downstream scRNA UMAP analysis

  #22 opened 2 months ago by ninashenker
  0

• Error in Bulk2space "Incompatible dimensions"

  #21 opened 9 months ago by martina811
  0

• Questions about input data requirements

  #16 opened 10 months ago by Archi6
  5

• Question: Scalability

  #12 opened 2 years ago by ccruizm
  4

• How to process the result data

  #20 opened a year ago by yqkiuo
  0

• Bulk RNA normalization

  #19 opened a year ago by emil-furat
  0

• Confused about the train/test steps

  #14 opened 2 years ago by Bennylikescoding
  4

• Potential applications of Bulk2space

  #18 opened a year ago by AlexUOM
  0

• β-VAE algorithm in the paper

  #13 opened 2 years ago by wxpbioinfo
  1

• Effect of Irrelevant Bulk RNA-Seq Sample and Selection of Optimal Projects for Test Data

  #15 opened 2 years ago by cwarden45
  1

• Question of the DFRunner

  #17 opened 2 years ago by Starlitnightly
  0

• model.train_df_and_spatial_deconvolution error

  #10 opened 2 years ago by zhangqi234
  7

• the question of "quick start" section

  #11 opened 2 years ago by coconutll
  2

• Only obtain three cell types such as tumor cell, macrophages and neutrophils from bulk data?

  #8 opened 2 years ago by zhangqi234
  2

• Preproccessed PDAC data

  #9 opened 2 years ago by AlexUOM
  4

• Cannot locate the bulk2space.py script and directory after installation

  #4 opened 2 years ago by loganminhdang
  5

• Need Nvidia driver

  #2 opened 2 years ago by millersan
  3

• convert bulk transcriptomes into spatially resolved single-cell expression profile

  #7 opened 2 years ago by Echoloria
  2

• Cannot import CascadeForestClassifier from deepforest

  #5 opened 2 years ago by sarah-chapin
  2

• Data availability

  #3 opened 2 years ago by loganminhdang
  6

• No spatial sequence data

  #1 opened 2 years ago by liufuyan2016
  3