aafshinfard
PhD Candidate in Bioinformatics, UBC and BC Cancer (Genome Sciences Centre).
UBC & BC CancerVancouver
Pinned Repositories
aafshinfard
aafshinfard.github.io
abyss
:microscope: Assemble large genomes using short reads
abyss-activity
ABySS learning activity
arhamacademy.ca
arhamacademy.ca
ExSV
Qu-SV: Quick Detection of Complex Structural Variants in Haploid, Diploid and Cancer Genomes.
github_workshop
Github Workshop
abyss
:microscope: Assemble large genomes using short reads
physlr
:chains: Construct a Physical Map from Linked Reads
JupiterPlot
A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.
aafshinfard's Repositories
aafshinfard/ExSV
Qu-SV: Quick Detection of Complex Structural Variants in Haploid, Diploid and Cancer Genomes.
aafshinfard/github_workshop
Github Workshop
aafshinfard/aafshinfard
aafshinfard/aafshinfard.github.io
aafshinfard/abyss
:microscope: Assemble large genomes using short reads
aafshinfard/awesome-github-profile-readme
😎 A curated list of awesome GitHub Profile READMEs 📝
aafshinfard/bioconda-recipes
Conda recipes for the bioconda channel.
aafshinfard/bioconda-utils
Utilities for building and managing bioconda recipes
aafshinfard/CyrisXD
aafshinfard/fancy-git
That's a simple prompt changer to show a few cool git informations about your repository on terminal. You can choose among different styles and enjoy all the aliases it provides you. Feel free for contributing, pull requests and issues are always welcome! ;)
aafshinfard/GFA-spec
Graphical Fragment Assembly (GFA) Format Specification
aafshinfard/gfakluge
A C++ library and utilities for manipulating the Graphical Fragment Assembly format.
aafshinfard/gw2
aafshinfard/harshkumarkhatri
aafshinfard/innng
aafshinfard/jlord
It's me!
aafshinfard/JNP_repo
Repo for my exploratory data analysis
aafshinfard/JupiterPlot
A Circos-based tool to visualize genome assembly consistency
aafshinfard/MasonSlover
My GitHub profile README.md!
aafshinfard/matyo91
Github Profil description
aafshinfard/MrStanDu33
aafshinfard/NanoSim
Nanopore sequence read simulator
aafshinfard/ntEmbd
Deep learning embedding for nucleotide sequences
aafshinfard/ntJoin
🔗Genome assembly scaffolder using minimizer graphs
aafshinfard/ntLink
Assembly scaffolder using long reads and minimizers
aafshinfard/physlr
:chains: Construct a Physical Map from Linked Reads
aafshinfard/pr2tik1
My GitHub profile-README
aafshinfard/RLELR
Run-length encoding (RLE) for long reads
aafshinfard/SuperSupeng
aafshinfard/temp
Temporary directory for scripts and codes with no specific project linked to them