ablab/spades

== Error == finished abnormally, OS return value: -11

efe3506 opened this issue · 5 comments

efe3506 commented

Description of bug

I'm keep getting this OS return value: -11 error. Does anyone can help?

spades.log

spades.log.gz
spades_test.log.gz

params.txt

params.txt.gz
params_test.txt.gz

SPAdes version

SPAdes_v3.15.5

Operating System

Ubuntu 22.04.4 LTS

Python Version

Python v3.10.12

Method of SPAdes installation

manual

No errors reported in spades.log

  • Yes
asl commented

Hello

Likely the filesystem on /media/efe/6EA8DE95A8DE5AE3/ does not support memory-mapped files.

adriansh11 commented

I have the same problem.
spades.log
params.txt

PAClFlER commented

same is here. if it is i/o issue what is the solution?
params.txt
spades.log

efe3506 commented

I reinstalled with conda and run with conda. Its okey now

  • 👍1
adriansh11 commented

I reinstalled with conda and run with conda. Its okey now

same. conda really resolved the problem.

  • 👍1