abria/TeraStitcher

Issues

• Memory Leak Issue

  #100 opened 8 months ago by zzhmark
  0

• Issues: Different result in step 2 when using MPI version and CUDA version

  #99 opened a year ago by Anson-Jiaqi
  0

• Issue with Tile Overlap Calculation Resulting in Duplication of Features in Stitched Images

  #98 opened a year ago by YCabara
  0

• Is it possible to change the fill in color for sparse images?

  #97 opened 2 years ago by ilykos
  0

• stitching RGB images works better when source image was intensity inverted

  #45 opened 6 years ago by rmd13
  3

• multichannel data - shifts between channels

  #96 opened 3 years ago by pawlowska
  0

• Projin and projout paths cannot contain the string '-2'

  #94 opened 3 years ago by bdsinger
  0

• Parastitcher problem (float division by zero)

  #76 opened 4 years ago by snehashis-roy
  7

• Expected throughput for teraconverter with hdf5 (imaris) output

  #92 opened 3 years ago by richardbeare
  0

• Build problems - missing step somewhere?

  #89 opened 3 years ago by richardbeare
  12

• terastitcher vs terastitcher2

  #90 opened 3 years ago by richardbeare
  1

• CUDA 11.4 compile issue

  #91 opened 3 years ago by k1moradi
  0

• How to define missing tiles (sparse data) when building an xml import

  #82 opened 4 years ago by richardbeare
  2

• Meaning of the error "cannot compute origin". Trying to stitch --sparse data with three channels

  #85 opened 3 years ago by ilykos
  1

• Managing teraconverter memory usage

  #67 opened 5 years ago by chrisroat
  6

• Bad memory deallocation

  #83 opened 4 years ago by chrisroat
  3

• Error when using xml descriptor (TiledXY|3Dseries)

  #84 opened 4 years ago by chrischoi97
  1

• How to correctly set parameters for TIFF stack

  #75 opened 4 years ago by chrisroat
  19

• Disable subsampling for Z axis + --isotropic problem

  #81 opened 4 years ago by richardbeare
  2

• Link to XML file does not work

  #80 opened 4 years ago by saskra
  4

• error while loading shared libraries: libjvm.so

  #77 opened 4 years ago by saskra
  2

• terminate called after throwing an instance of 'IconImageManager::IOException'

  #79 opened 4 years ago by saskra
  2

• Unable to find stacks in the given directory

  #78 opened 4 years ago by saskra
  0

• Empty Output When Using CLI

  #74 opened 4 years ago by JulianPitney
  10

• How To Keep Track of Image Scaling After Stitching?

  #73 opened 4 years ago by JulianPitney
  5

• Missing slices in merging

  #69 opened 4 years ago by sharonkatz510
  2

• 'std::bad_alloc' Exception

  #70 opened 4 years ago by snehashis-roy
  0

• 2D stitching: inconsistent metadata

  #68 opened 4 years ago by vzickus
  4

• Is it possible to output exact tiling?

  #59 opened 5 years ago by chrisroat
  21

• align already X-Y stitched images along the Z-axis

  #66 opened 5 years ago by kim1117
  1

• Updated Parastitcher3.2.0.pyc for Python 3.7

  #52 opened 5 years ago by microscopy-jacksonlabs
  7

• Terastitcher ignoring some xml fields?

  #63 opened 5 years ago by chrisroat
  8

• Use Teraconverter to merge images using Terastitcher generated xmls

  #65 opened 5 years ago by snehashis-roy
  1

• Long time taken during import step

  #64 opened 5 years ago by snehashis-roy
  6

• Clarification on two-level folder hierarchy

  #62 opened 5 years ago by snehashis-roy
  8

• cannot find reliable displacements for low-resolution data

  #60 opened 5 years ago by zahramansoor
  5

• Memory usage >60GB when running merge step

  #61 opened 5 years ago by JulianPitney
  7

• stitching problem

  #56 opened 5 years ago by wsun5
  0

• additional image

  #58 opened 5 years ago by wsun5
  1

• additional info

  #57 opened 5 years ago by wsun5
  1

• Stack to channels: Is there a way to convert an "Unstitched 3D" with three color channels to an RGB image?

  #54 opened 5 years ago by ilykos
  2

• Terastitcher crashes when loading XML from slidebook export

  #55 opened 5 years ago by rhenley
  1

• 'Bad allocation' error

  #53 opened 5 years ago by ilykos
  1

• ERROR: in TeraStitcher v1.10.16 when imports a tiff3D

  #51 opened 5 years ago by arafelyb8
  1

• Issue with ParaConverter (divide by 0)

  #49 opened 5 years ago by JeffreyStirman
  4

• Stitching 3-channel 3d Tiffs

  #50 opened 5 years ago by PhilipRuthig
  4

• Can TeraStitcher stitch the randomly captured tiles from a C.elegans like creature?

  #48 opened 6 years ago by rmd13
  1

• teraconverter: how to downsample at free ratio instead of 2^level-1

  #47 opened 6 years ago by rmd13
  2

• No voxel dimension information available on the meta information of "TIFF (tiled, 3D)" image generated by TeraStitcher/TeraConverter

  #46 opened 6 years ago by rmd13
  3

• Loading ome tiff into terastitcher

  #44 opened 6 years ago by pawlowska
  10